Skermanella mucosa: JL100_031025
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Entry
JL100_031025 CDS
T07652
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K21136
membrane fusion protein, multidrug efflux system
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_031025
Transporters [BR:
smuc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JL100_031025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
RND-MFP_C
HH_EMRA
HH_MFP_RND
BSH_CzcB
YknX_C
BSH_Fcp1
HH_CzcB
BSH_CusB
HH_YBHG
CzcB_C
Phage_scaffold
MT
Motif
Other DBs
NCBI-ProteinID:
UEM24641
LinkDB
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Position
pSM-1:complement(228012..229070)
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AA seq
352 aa
AA seq
DB search
MLALVSLTLLAACGGEEESVAEPIRPVRVVTVEKREAGETVTLTGQVQAQEEVSLSFRVG
GRMIERPVNVGDRVEAGQVIARLDPEPARNALQTARANLTAAMGQLTRVRNDYDRQETLL
GQGWTTRARYDQALEARKSAEAQLDAAQAQLNIAEDHLGYTELVADSAGSVTARGAEPGE
VVAAGRMIVHLARQGGRDAVFDVPARVIQNAPADPFITVALTSDPTVSTTGRVREVAPQA
DPVTRTFQIRIGLHDPPEAMRLGSTVVGSMQLGGAGAIEIPASALTQANRQPAVWIVDPA
SGTVALRNIDVDRFDLARVVVAQGLEPYDVVVTAGVQALRPGQQVRILGAAP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgcgctcgtatcgctgacgctgctggcggcgtgcgggggcgaggaggaaagcgtg
gccgagccgatccgtccggtccgggtggtgacggtcgagaaacgcgaggcgggtgagacg
gtcaccctgacggggcaggtccaggcgcaggaggaggtcagcctgtcgttccgcgtcggc
gggcggatgatcgagcgcccggtgaacgtgggcgaccgcgtggaggccggccaggtcatc
gcccggctcgatcccgaaccggcgcgcaacgccctccagacggcccgcgcgaacctgacg
gccgccatgggccagttgaccagggtgcgcaacgactacgaccggcaggagaccctgctg
ggccagggctggaccacccgcgcgcgctacgaccaggcgctggaggcgcggaagtccgcc
gaggcccagctcgatgcggcccaggcgcagctcaacatcgccgaggaccacctgggatac
accgaactggtggcggacagcgccggctcggtcaccgcccgcggggccgaaccgggcgag
gtcgtggcggccggccggatgatcgtgcacctggcccgccaaggcgggcgcgacgccgtc
ttcgacgtgccggcgcgggtgatccagaatgcgcccgccgaccccttcatcaccgtggcg
ctgacctcggacccgacggtgagcaccaccggccgggtgcgcgaggtggcacctcaggcc
gatcccgtgacccgcaccttccagatccggatcggcctgcacgacccgcccgaggcgatg
cggctcggctccacggtcgtcgggtcgatgcagttgggcggggccggcgcgatcgagatc
cccgcctcggccctgacccaggccaaccgccagcccgccgtctggatcgtcgatccggcg
agcggcaccgtggcgctccgcaacatcgacgtcgatcgcttcgacctcgcccgggtcgtc
gtggcgcaagggctggagccttatgacgtcgtcgtcacggccggcgtgcaggcgctgcgg
ccgggtcagcaggtccgcatcctgggtgcagcaccgtga
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