Skermanella mucosa: JL100_031770
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Entry
JL100_031770 CDS
T07652
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_031770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_031770
Transporters [BR:
smuc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JL100_031770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
UEM24231
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All DBs
Position
pSM-1:complement(390864..392141)
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AA seq
425 aa
AA seq
DB search
MGFAVVVAFLALFMLGFPVVYAILLPSIAYVLIEGLPLGLLAQRITYALDSFPLVAVPLF
IFVGNLMNLSGITDRIFRFAYTLVGRIPGGLAQVNVFGSLIFSGMSGAALADIGGLGRIE
IDAMKKRGFDASFAGAVTAASATLGPIFPPSIPLIVYGSITSVSIVQLLVAGIMPALVCT
LMLMVTVFIVAVRHKHPRADRWPTAREVVRDFLPALPAIVAPALMIAGMTAGAFTPTEAA
AITAVYVIVISAVFYRELSVEHLWNSAVLTARSSSAILIIVAAAALFGWILAVEQVPQTF
AAALLTLSKDPMVLLIIANFIFFIAGMFLDSTTATLLLVPIIAPPLVLAGVDPVQLGIVT
IFNLMVGLVTPPMGLSLFLVSDIAKVSLRQLLRALLPFYVPLLSTLAILTFAKDFTLWLP
RLIAQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgccgtcgtcgtcgccttcctggcgcttttcatgctgggcttcccggtcgtc
tacgccatcctgctgccctcgatcgcctatgtgctgatcgagggcctgccgctcggcctc
ctggcccagcgcatcacctacgcgctcgactccttcccgctggtcgcggtgccgctgttc
atcttcgtcggcaacctgatgaacctgtcgggaatcaccgaccgcatcttccgcttcgcc
tataccctggtcggccgcatcccgggcgggctggcgcaggtcaacgtcttcggcagcctg
atcttctccggcatgtcgggcgcggcactcgccgatatcggcggcctcggacgcatcgag
atcgacgccatgaagaagcgcggcttcgatgcttccttcgccggggcggtcaccgcggcg
tcggcgacgctcgggccgatctttccgccgtcgatccccctgatcgtgtacgggtcgatc
acgagcgtgtcgatcgtgcagctgctggtggccggcatcatgccggcgctggtctgcacg
ctcatgctgatggtgaccgtgttcatcgtcgcggtccgccacaagcacccgcgtgccgac
cgctggccgacggcccgggaggtcgtgcgcgacttcctgcccgcgctgccggccatcgtc
gctcctgcgctcatgatcgccggcatgactgccggtgccttcacgccgacggaagccgcg
gcgatcacggcggtctatgtcatcgtcatcagcgccgtcttctaccgcgagctcagcgtc
gagcacctgtggaactcggccgtgctgacggcccgcagctcgtcggcgatcctgatcatc
gtcgccgccgccgcgctgttcggctggatcctggcggtggagcaggtgccccagaccttc
gccgcggcgctgctgacgctctccaaggacccgatggtcctgctcatcatcgccaatttc
atcttcttcatcgccggcatgttcctcgactcgacgacggcgaccctgctgctggttccg
atcatcgcgccgccgctcgtgctcgccggggtcgacccggtgcagctcggcatcgtcacc
atcttcaacctgatggtcggcctggtgactccgccgatgggactgtcgctgttcctcgtg
tccgacatcgccaaggtttcgttaagacagctcctcagggcgttgctgcccttctacgtc
ccgctcctgtcaacgcttgcgatcctcaccttcgcgaaggatttcacgctgtggctgcct
cgcctgatcgcccaatag
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