KEGG   Skermanella mucosa: JL100_032110
Entry
JL100_032110      CDS       T07652                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
smuc  Skermanella mucosa
Pathway
smuc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:smuc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JL100_032110
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:smuc02022]
    JL100_032110
Two-component system [BR:smuc02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   JL100_032110
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_16 HTH_28 AAA HTH_30 AAA_2 BrxC_BrxD bpMoxR HTH_50 TadZ_N
Other DBs
NCBI-ProteinID: UEM24755
LinkDB
Position
pSM-1:complement(452115..453434)
AA seq 439 aa
MRIASSQALQLAGIEARGFEHAEHARDAIYPGFPGVIVTDVRLPGMDGLALLQYALKTDP
KLPVILITGHGDISMAVEAMRTGAYDFIEKPFPPERLVGAVQRALERRFLTLEVETLRRR
LSDREGIEAILLGQSAAIKEVQRLILQVADTSADVLILGETGTGKELVARCLHQFSRRRD
DRFVALNCGAFPETMFDAEVFGHEAGAFTGAGRQRIGRLEYAAGGTVFLDEVESMPLSLQ
VKLLRALQERTIERLGSNDEIPIDVRIVAATKEDLSEMSRRQRFRDDLYYRLNVVAMELP
PLRDRREDIPVLFEHFVLQAAARYNRDAPVLANEQRRQLMAYAWPGNVRELRNVADRFVL
GVHGASLDLLGEMAPEVSTLAEQVDAFERAVIVDAMSRHHGNVAAVSHHLQLPRKTLYDR
LHRFNLAIESFRSSGGTES
NT seq 1320 nt   +upstreamnt  +downstreamnt
ttgcggattgccagcagtcaagcgctgcagctggccggcatcgaagccaggggctttgaa
catgccgagcacgcgcgtgacgccatttaccccggtttcccgggtgtaatcgtgaccgat
gtgcggctgccgggcatggatggactggcgctgctgcaatacgcgctgaaaaccgatccc
aagctgccagtcatcctgatcaccggacacggcgacatctccatggcggtcgaggcgatg
cgcacgggggcttatgatttcattgagaagccgttcccgccggaacgtctggtcggtgcc
gttcagcgcgcgcttgagcggcgtttcctgacgctcgaggtcgaaacgctgcggcgccgg
ctgagcgaccgcgaggggatcgaagcgatcctgctgggccaatccgcggcaatcaaggag
gttcagcgcctgatccttcaggtggccgacacctcggccgatgtcctgatcctgggcgag
accggcaccggcaaggagctggtcgcccgctgtcttcaccagttctcccgacggcgcgac
gaccgcttcgtcgctctgaactgtggcgcctttcccgaaaccatgttcgatgccgaggtg
ttcggtcatgaggccggggccttcaccggagccggccggcaacggatcggacgactggag
tacgccgccggtggcacggtgtttctcgacgaggtcgagtccatgccgctgtcgctccag
gtcaagcttctgcgggcgctgcaggaacgtacgatcgaacgcctgggctcgaatgacgag
attccgatcgatgtccggatcgttgccgcgaccaaggaggatctgtccgaaatgagccgg
cggcagcgattccgcgacgacctctactatcgcctgaatgttgttgccatggagctgcca
ccgctgcgcgaccggcgcgaggacatcccggtgctgttcgagcatttcgtgctgcaggcc
gccgcccgatacaatcgcgacgcgccggttctggcgaacgaacagcggcggcagctgatg
gcttatgcgtggccgggcaatgtcagggagctgcgcaacgtggccgaccgcttcgtgctc
ggcgtgcatggcgccagcctagatctgctcggggagatggcgccggaggtgtcgacgctc
gccgaacaggtcgatgccttcgagcgggcggttatcgtggatgcaatgtcccggcaccac
ggcaacgttgcggccgtgagccatcatctgcagcttccacgcaaaacgctttatgatcgc
ctgcaccgcttcaatctggcaatcgaatctttccgatcctctggcgggaccgaaagttga

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