Skermanella mucosa: JL100_032445
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Entry
JL100_032445 CDS
T07652
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smuc03000
]
JL100_032445
Transcription factors [BR:
smuc03000
]
Prokaryotic type
Helix-turn-helix
Other families
JL100_032445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
HTH_50
AAA_5
HTH_28
AAA_2
Xre-like-HTH
HTH_1
HTH_30
AAA
HTH_23
HTH_7
HTH_29
Mg_chelatase
GAF_2
HTH_17
RWP-RK
ChuX_HutX
HTH_Tnp_ISL3
NUMOD1
HTH_Tnp_1
HTH_22
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UEM24339
LinkDB
All DBs
Position
pSM-1:531604..533619
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AA seq
671 aa
AA seq
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MSTNKLIGKRIADALRTTNSDVLAGSQSITMNAWESFVLGRTDRVPAVRNVIANSWMRCL
GDGVNPHGSTAPLVPCSDIELERQLNCDLLQAASGVLAEAVDLLAGTGSLMLITNADGVV
LEAVGDLRTVSAGQEICLGQGGHWKESNAGTNGIGTALAAGQPVLINAAEHYCEGIKKWS
CAGAPIRDPIDGTIIGLLDISGLKQTFTVQVLALTTIAAHAIERNIAQQTEIKHFRLLEA
CLEESAKYAEDGLIACDAKGRVLHVSRKAIQLLERQFGPGVVNLRRGNRISNLPGLAEVS
DCATSLLPELRADWVKPLFVDGKRCGTLLVIPGTSGRRIAGRVRSVPHESDPGRADFNCI
IGNSPSMQTVIDQARRLASLSIPVLIEGETGVGKELFARAIHGTSDVAGGPFVPFNCGAV
SKEMLASELFGYVRGAFTGASTEGRVGRFELANDGVLCLDEIGELPLDLQPYLLRVLEEG
IIYRIGDNTPRRVNARLLAMTNRNLREEVAAGRFRRDLYYRLNVVKLHVPPLRKRDGDVD
QLIAHFNQIVADRYSRDPVQFTAETMDALRLYAWPGNVREVRNLMERLILLSSKKIVGVE
DLPEELRETVAETGSAKPLEGPATLEMTERRVIEAAVAESRGNMTDAARALGISRSTLYR
KMSQYEIDRDS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaacaagttgataggaaagcgcatcgctgacgcgttgcgcaccaccaactct
gacgtactcgccggaagccaatctataactatgaatgcatgggaaagttttgttttagga
cgcactgaccgggttccggcggtgcgtaatgtcatcgcgaattcttggatgcgctgccta
ggtgatggtgtcaacccacatggctcgacggcgccattggtaccttgcagcgatatcgag
ctggaaagacagcttaattgtgatttgttgcaggccgcctccggcgtgctggcagaagca
gtcgatctgttggcaggcacaggatcgctcatgctgattacgaatgccgatggtgtcgtg
cttgaagccgttggtgatctgcggacggttagcgctgggcaggaaatttgcctaggtcaa
ggcgggcactggaaggagagcaatgctggcaccaatggcattggcacagcgctcgcagca
gggcaaccagtgttgataaatgcggccgaacactattgcgaaggcatcaagaagtggagt
tgcgctggtgcgccaatccgcgatccaatagacggaactattatcggcttgctcgatata
tcaggactaaaacaaacttttactgtacaggttcttgccttaactacaattgcagctcat
gccattgaacgtaatattgcgcagcagacagaaattaagcattttcgcctattggaagcc
tgtctggaggagtccgcaaaatatgcagaggatggcctgattgcatgtgatgctaaagga
cgcgtgctgcacgtcagtcgcaaagcgatacaattacttgaacgacagttcggaccgggc
gtagtgaacctcaggcgtgggaaccggatctccaatttgcccggactggcggaggtgagt
gattgtgccaccagtttattgcctgagctacgagcagattgggtcaagcccctgttcgta
gacggaaaacgctgcggcacactacttgtgatcccaggcacatccgggaggcggattgct
ggtcgcgtccgctccgtgccacatgagagcgaccctggccgtgcagacttcaattgcatt
atcgggaacagcccgagcatgcaaaccgtcatagatcaagctcgccgattggcatctctg
tctatcccggtccttatcgagggtgaaacgggggtcggcaaagaactctttgcgcgggcg
atccacggcaccagcgatgtggcaggcggaccattcgttccgttcaactgtggcgctgtt
tccaaggagatgttggctagtgagctattcggctatgtccgtggagccttcacgggggca
agcaccgaaggtcgcgtaggacgtttcgagcttgctaatgatggcgtactgtgcttggac
gaaatcggtgaattgcctctcgatctgcaaccctatcttctgcgcgttctagaggaaggg
atcatttatcgtattggcgacaacactccccggcgggttaacgcccgtcttttggcaatg
accaaccgaaacttgcgcgaggaagttgcagcagggcgcttccggcgggatctttattac
cggcttaacgtggttaaattgcacgtccctccgctccggaagcgggacggagatgtcgat
cagctaatagcccacttcaaccaaatagtggccgatcgctacagcagggaccctgtccag
ttcacggccgagactatggatgcgctccgtctctatgcttggccgggcaatgtccgggag
gtaaggaatctgatggagcgactgattttgttgtcttctaagaaaatcgtcggtgtggaa
gatttgccggaggaactgcgtgaaacagttgctgagaccggatctgctaaaccgttagaa
ggaccggcaacacttgaaatgactgagcgtagggtcatagaggcggccgttgcagaaagc
cggggtaatatgacggacgcggcacgcgcattgggcatttcccgcagtaccctgtaccgg
aaaatgagtcagtacgagattgatcgcgatagttga
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