Skermanella mucosa: JL100_033110
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Entry
JL100_033110 CDS
T07652
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00630
Glyoxylate and dicarboxylate metabolism
smuc00680
Methane metabolism
smuc01100
Metabolic pathways
smuc01120
Microbial metabolism in diverse environments
smuc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JL100_033110 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
JL100_033110 (fdhF)
Enzymes [BR:
smuc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
JL100_033110 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_8
Fer4_7
Fer2
Fer4_9
Fer4_17
Fer4_10
Fer4_Nqo3
Fer4
Fer4_21
Fer4_16
Fer4_4
Fer4_2
Fer4_6
PC4
DUF3418
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
UEM24935
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All DBs
Position
pSM-2:1766..4540
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AA seq
924 aa
AA seq
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MTEAIRFFLDGEEVEARPGETIWQVANRRGTEIPHLCYTPAPGYRPDGNCRACMVEVEGE
RVLAASCIRKPQNGMKVNTASESAKSARKLVFELLVGDQPDRKEAHDPDARFWQWADRLE
VSDSRFPGADAAPEKDFSHPAMAVQLDACIQCNLCVRACREVQVNDVIGMAMRGHAEKIV
FDFDDPMGVSTCVACGECVQACPTGALMPATQVDAKTGVFSAAPDRKVDSVCPYCGVGCQ
LTYNIKDDKLLSVTGRDGPSNQNRLCVKGRFGFDYVHHEDRLTVPLIRREGVSKHDVDID
PENPLTHFRRASWEEALEVAAKGLARIRDERGGDALAGFGSAKGSNEEAYLFQKLVRTGF
GTNNVDHCTRLCHASSVTALIEGIGSGAVTAPFMSAKDAEVIVVIGANPTENHPVAATFF
KNAVERGAKLVVMDPRGQALKRFATHMLQFKPGRDVAMLNAMLNVIITENLYDQQYVQAN
TQDFEELKEHVKDYTPERMEEICGIAADELRTVARLYARSEASIIFWGMGVSQHTHGTDN
VRCLIAMALTTGQIGRPGTGLHPLRGQNNVQGASDAGLIPMVFPDYQSVETPAIREFYED
LWGTKLPGKRGLTVVEIMDAIHDDKISGMYIMGENPAMSDPDVGHAREALAKLDHLVVQD
IFLTETAKYADVVLPASAWPEKDGTATNTNRQVQMGRKALPLPGEAREDWEIVTQLANRL
GLNWTYSHPSEIFAEMTKAMPSLANITWDRLEREHSVTYPCDAPDQPGHEIVFGNGFPTE
TGRGRLVPAAIIPPAEEPDAEYPMVLTTGRQLEHWHTGAMTRRAQVLDDLEPEAVAYMAP
ADLRRMGLNGGDRMRVSTRRGHVELVARADYAVPTGLIFMPFCYAEAAANVLTNPQLDPF
GKIPEFKYCAARVEPLREAAQAAE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggcgatccgatttttcctcgacggcgaagaggtcgaggcccgtcccggcgag
accatctggcaggtcgccaaccgtcgcggcaccgagattccccacctgtgctacaccccg
gcccccggctaccggcccgacggcaactgccgcgcctgcatggtcgaggtcgaaggcgag
cgcgtgctggccgcgagctgcatccgcaagccgcagaacggcatgaaggtcaacaccgcc
agcgagagcgccaagtcggcccgcaagctggtgttcgagctgctggtcggcgaccagccc
gaccggaaggaggcgcacgaccccgacgcccgcttctggcagtgggccgacagacttgaa
gtctccgacagccgcttccccggcgccgacgcggcgcccgagaaggacttcagccacccc
gccatggcggtccagctcgacgcctgcatccagtgcaacctgtgcgtccgcgcctgccgc
gaggtccaggtcaacgacgtgatcggcatggcgatgcgtggccacgccgagaagatcgtc
ttcgacttcgacgatcccatgggcgtcagcacctgcgtcgcctgcggcgagtgcgtccag
gcctgcccgaccggcgccctgatgccggccacccaggtggacgccaagaccggcgtcttc
tcggcggcgcccgaccgcaaggtggacagcgtctgcccctattgcggcgtcggctgccag
ctcacctacaacatcaaggacgacaagctgctgtcggtcaccggccgcgacggcccgtcg
aaccagaaccggctttgcgtcaagggccgcttcggcttcgactatgtccaccacgaggac
cggctgaccgttccgctgatccgccgcgagggcgtgtccaagcatgacgtggacatcgac
cccgagaacccgctgacccacttccgccgcgcgagctgggaagaggcgctggaggtggcg
gccaagggcctggcgaggatccgcgacgagcggggcggcgacgcgctggccggcttcggc
tccgccaagggctcgaacgaggaggcctacctgttccagaagctggtccgcaccggcttc
ggcaccaacaacgtcgaccactgcacccggctatgccacgcctcctcggtgacggcgctg
atcgagggcatcggctccggcgcggtgacggcccccttcatgtcggccaaggacgccgag
gtgatcgtggtgatcggcgccaacccgaccgagaaccatccggtcgccgcgaccttcttc
aagaacgcggtggagcggggcgccaagctggtggtgatggacccgcgcggccaggcgctg
aagcgcttcgccacccacatgctccagttcaagccgggccgcgacgtggcgatgctgaac
gccatgctcaacgtcatcatcacggagaacctgtacgaccagcaatatgtccaggccaac
acccaggacttcgaggagctgaaggagcacgtcaaggactacacgcccgagcggatggag
gagatctgcggcatcgcggccgacgagctgcgcaccgtggcgcgcctctacgcccggtcc
gaggcctcgatcatcttctggggcatgggcgtgtcccaacacacccacggcaccgacaac
gtgcgctgcctgatcgcgatggcgctgaccaccggccagatcggccgccccggcaccggc
ctgcatcccttgcgcggccagaacaacgtgcagggcgcgtccgacgccggcctgatcccc
atggtcttccccgactatcagtcggtggaaaccccggcgatccgcgagttctacgaggac
ctgtggggcaccaagctgccgggcaagcgcgggttgacggtggtcgagatcatggacgcg
atccatgacgacaagatcagcggcatgtacatcatgggcgagaacccggccatgtccgac
ccggacgtgggccacgcccgcgaggcgctggcgaagctcgaccatctcgtggtccaggac
atcttcctgaccgagacggccaagtacgccgacgtggtccttccggcctccgcctggccg
gagaaggacggcacggcgaccaacaccaaccgccaggtgcagatgggccgcaaggccctg
ccgctgccgggcgaggcgcgggaggactgggagatcgtcacccagctcgccaaccggctg
ggcctcaactggacctacagccatcccagcgagatcttcgccgagatgaccaaggccatg
ccgtcgctggcgaacatcacgtgggaccggctggagcgcgagcattccgtcacctacccg
tgcgacgcgccggaccagccgggccacgagatcgtgttcggcaacggtttcccgaccgag
acgggccgcggccggctggtgccggcggcgatcatcccgccggccgaggagcccgacgcc
gagtacccgatggtgctgaccaccggccgccagctggagcactggcacaccggcgcgatg
acccgccgggcgcaggtgctggacgacctggagccggaagccgtcgcctacatggccccc
gccgacctgcgccggatgggcctgaacggcggcgaccgcatgcgcgtctccacccggcgc
ggccatgtggaactggtggcgcgggccgactatgcggtgccgaccggcctgatcttcatg
ccgttctgctacgccgaggccgccgccaacgtgctgaccaacccgcagctcgaccccttc
ggcaagatcccggagttcaagtactgcgcggcccgtgtcgaaccgctgagggaagccgcc
caggcggcagagtag
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