Skermanella mucosa: JL100_033455
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Entry
JL100_033455 CDS
T07652
Symbol
gcl
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00630
Glyoxylate and dicarboxylate metabolism
smuc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JL100_033455 (gcl)
Enzymes [BR:
smuc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
JL100_033455 (gcl)
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Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
UEM24998
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Position
pSM-2:83179..84948
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AA seq
589 aa
AA seq
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MPRMTAIEAAVHVLEKEGVTICFGVPGAAINPFYSALQRNGRIGHILARHVEGASHMAEG
YTRAEAGNIGICVGTSGPAGTDMITGLYSAQADSIPILCITGQAPRARLHKEDFQAIDIA
SIAKPVTKWATTVLEPAQVPYVFQQAFHTMRSGRPGPVLIDLPLDVQLAEIEFDIDTYEP
LKPYKPAATRQQIEKALAMLDAAERPLIVAGGGIINADASAQLVEFAEITGVPVIPTLMG
WGTIPDDHPLMAGMVGLQTSHRYGNATMLKSDFVLGIGNRWANRHTGSVATYTKDRKFVH
VDIEPTQIGRVFMPDFGIVSDAGAALDLFVEVAREMKAAGKLRDRSAWAAECLTRKRTMH
RRTDYDNVPIKPQRVYQEMNQAFGEDTCYISTIGLSQIAGAQFLHVYKPRHWINCGQAGP
LGWTLPAALGVRAADPKRRIVALSGDYDFQFLIEELAVGAQFKLPYIHVVVNNSYLGLIR
QAQRGFQMDFQVQLSFENVNAPELNGYGVDHVAVAQGFGCKAIRVTDPNEIQSAFAQADA
LMEEFQVPVVVEIILERVTNIAMGTEIDNVTEFEEILDLPEVQPTRVLV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatgacggctatcgaagcggcggttcatgtgctggagaaggagggcgtcacg
atctgtttcggcgtccccggcgccgccatcaacccgttctattcggcgcttcagcggaac
ggcaggatcggccacatattggcgcgccacgtcgagggcgcctcgcacatggccgagggc
tacacccgcgccgaagccggcaatatcgggatctgcgtcgggacctcgggtccggcgggc
accgacatgatcaccggcctctattccgcccaggccgacagcatcccgatcctctgcatc
accgggcaggcgccgcgcgcccggctgcacaaggaggatttccaggcgatcgacatcgcg
agcatcgccaagcccgtgaccaagtgggcgacgaccgtgctggagccggcccaggtgccc
tacgtcttccagcaggcgttccacaccatgcgctccggccggcccggcccggtgctgatc
gacctgccgctcgacgtccagctggcggagatcgagttcgacatcgacacctacgagccg
ctgaagccctacaagccggccgcgacccgccagcagatcgaaaaggcgctggcgatgctg
gacgcggcggagcgtccgctgatcgtcgccggcggcggcatcatcaacgccgacgcctcg
gcgcagctggtcgagttcgccgagatcaccggcgtgccggtcatcccgaccctgatgggc
tggggcacgatccccgacgaccatcccttgatggccggcatggtgggattgcagacctcg
caccgctacggcaacgccacgatgctgaagtccgacttcgtgctggggatcggcaaccgc
tgggccaaccgccataccggttcggtcgcgacctacacgaaggaccgcaagttcgtccat
gtggacatcgagccgacccagatcggccgggtgttcatgccggacttcggcatcgtgtcc
gacgcgggcgccgccctggacctgttcgtcgaggtcgcccgcgagatgaaggccgcgggc
aagctgagggaccgctccgcctgggccgctgagtgcctgacccgcaagcggaccatgcac
cggcgcaccgattacgacaacgtgccgatcaagccgcagcgcgtctatcaggagatgaac
caggccttcggcgaggacacctgctacatcagcacgatcgggctgtcgcagatcgccggc
gcccagttcctccacgtctacaagccgcggcactggatcaactgcggccaggccggcccc
ctgggctggaccctgccggcggcgctcggcgtccgggcggccgatccgaaaaggcggatc
gtcgccctgtcgggcgactacgacttccagttcctgatcgaggagctggcggtcggcgcc
cagttcaagctgccctacatccatgtggtcgtgaacaactcctacctggggctgatccgg
caggcccagcgcggcttccagatggacttccaggtccagctctcgttcgagaacgtcaac
gcgccggaactgaacggctacggcgtcgaccatgtcgcggtcgcccagggcttcggctgc
aaggcgatccgggtgaccgatccgaacgagatccagtccgccttcgcccaggccgacgcc
ctgatggaggagttccaggtcccggtcgtcgtcgagatcatcctggagcgggtgaccaac
atcgcgatgggcacggagatcgacaacgtgaccgagttcgaggagatcctcgacctgccg
gaggtgcagccgacccgcgtgctggtctga
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