Skermanella mucosa: JL100_034200
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Entry
JL100_034200 CDS
T07652
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
smuc
Skermanella mucosa
Pathway
smuc02010
ABC transporters
smuc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL100_034200
03070 Bacterial secretion system
JL100_034200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_034200
02044 Secretion system [BR:
smuc02044
]
JL100_034200
Transporters [BR:
smuc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JL100_034200
Secretion system [BR:
smuc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JL100_034200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
Peptidase_C39
SMC_N
AAA
LPG_synthase_TM
AAA_29
AAA_7
Mg_chelatase
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UEM24799
LinkDB
All DBs
Position
pSM-2:249380..252592
Genome browser
AA seq
1070 aa
AA seq
DB search
MDTIETVRNTAALEAIRSVLQTHVLFNVLPGAEKRAIELLLEVRQIPAGKRLFTQGANAD
GMYVIHDGTARLKENTGTKLVSVGLIEPGATIGQTSLLEETKWPHHVIAETPLTLVCLRA
DRARLLIAESRVVDEHFRRYVGLVEVGERLRAMLGNATYSAEEFSDLLSKMGVKLIRADS
AVFTQGDHDPRLYFIESGAVELIRAPISGDPISLSRCGRGTLIGETGALPRRSPKGAASG
IQTYTARALTDVTVLVIYQQTVERILSLNPELRQRLSERARDIEQIEADEIAARKRAEGV
DLRIKLAEGMSEDEFRASVKAKEATKLAVIRQNTQADSAAACLAMVMGHYGRKFTLGQMQ
EVTGLNTPETNPDEIIRGAETLGFRAKGYSLTYADLKGLKLPAIIGWQGYHWIVLVKAGD
REVEVADPAKGLARIKRDEFIASWTAADVAGVLDRRPDAGVLIALEPTVKFEKEEEAKSS
VRHFINYIMPYKKYYGEAILAAVVINILGLASPLFVQTIVDNVVVHHDVGLLNMMLGGMV
LVAVLTTAMSVVQSLLLAHTTSRLDMRLMSEFYRHVLSLPMDFFLTKNKGEILARFGENQ
KIRAILTGSTITVLMNTLMIVLYFLMMFAYSVPLSVIVVIFIPIYIGIVVYFTPKIKAIA
QEIFITNSQSQSYLIESLNGIEALKATSNEYFARARWENAFVENVNRSFRQQKLSLMSNS
LFKLATLASSIAVLWIGATQVMSGEMSIGELMGFNMLMGLVTGPVTQMVNLWNELQEVRI
AIDRVGDVLNVKSEHVTVSAPDKIQTQVRNLEGEIKFEQVNFSYNTNDQKRSVMHGFDLT
IHPGEHVAFVGPSGCGKSTIAKMVLGFYKPASGDLMIDGKDIRTMDLNSLRRNIGVVLQD
TFIFGGTVAENIALGDPEPDMQAVQEAAKLAGSEDFIINFPLGYQTRIGEKGMGLSGGQR
QRIGIARALYRRPKIMIFDEATSALDNESEARITQELKGVLVNRTSITIAHRLTTVMDSD
RICFIKDGKVQEQGSHTQLTDPEFLKENGYTGLYYQLARTQFDLPPLELK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatcgagaccgtcaggaacaccgcagcactcgaagcgatccgctccgtgctc
cagacccatgtcctgttcaacgtgctgccgggcgccgagaagcgcgcgatcgagctgctg
ctggaggtgcgccagatcccggccggcaagcgcctgttcacccagggcgccaatgccgac
ggcatgtacgtgatccacgacggcaccgcgcgcctgaaggagaataccggcaccaagctg
gtcagcgtcggcctgatcgagccgggcgccaccatcggccagacctccctgctggaggag
accaaatggccgcaccacgtgatcgccgagacgccgctgacgctggtctgcctgcgcgcc
gaccgcgcccggctgctgatcgccgagagccgggtggtggacgagcatttccgccgctat
gtcggcctggtggaggtcggcgagcggctccgcgccatgctcggcaacgcgacctattcg
gcggaggaattctccgacctgctgtccaagatgggcgtcaagctgatccgggcggacagc
gcggtcttcacccagggcgaccacgacccgcgcctctatttcatcgagagcggcgccgtc
gagctgatccgcgccccgatctccggcgacccgatctccctgtcgcgctgcggccggggc
accctgatcggcgagaccggcgcgctgccccgccgctcgcccaagggggccgccagcggc
atccagacctataccgcccgggcgctgaccgacgtgaccgtgctggtgatctaccagcag
acggtcgagcgcatcctgtcgctcaaccccgagcttcgccagcgcctctccgagcgcgcc
cgcgacatcgagcagatcgaggccgacgagatcgcggcgcgcaagcgggcggagggcgtg
gacctccgcatcaagctggccgagggcatgtcggaggacgagttccgcgcctccgtcaag
gcgaaggaggcgaccaagctggcggtgatccgccagaacacccaggccgacagcgccgcc
gcctgcctcgccatggtgatgggccattacggccgcaagttcaccctcggtcagatgcag
gaggtcaccggcctcaacacgccggagaccaaccccgacgagatcatccgcggcgccgag
acgctgggcttccgcgccaagggctactcgctgacctatgccgacctgaaggggctgaag
ctgcccgccatcatcggctggcagggctaccactggatcgtgctggtcaaggccggagac
cgggaggtggaggtcgccgaccccgccaagggcctggccaggatcaagcgggacgagttc
atcgcgtcctggacggcggccgacgtggccggcgtgctcgaccggcggcccgacgccggc
gtgctgatcgcgctggagccgacggtcaagttcgagaaggaggaggaggccaagtcctcc
gtccgccacttcatcaactacatcatgccgtacaagaaatattacggcgaggcgatcctg
gcggcggtcgtgatcaacatcctgggcctcgcctcgccgctgttcgtccagaccatcgtg
gacaacgtcgtggtccaccacgatgtcggcctgctcaacatgatgctgggcggcatggtg
ctggtggcggtgctgaccacggccatgtcggtggtccagagcctgctgctggcccacacc
acctcccggctcgacatgcggctgatgtcggagttctaccggcacgtgctcagcctgccg
atggacttcttcctgaccaagaacaagggcgagatcctggcccgcttcggcgagaaccag
aagatccgcgcgatcctgaccggctcgaccatcacggtgctgatgaacacgctgatgatc
gtgctctatttcctgatgatgttcgcctactcggtgccgctcagcgtgatcgtggtgatc
ttcatcccgatctatatcggcatcgtcgtgtacttcacgcccaagatcaaggcgatcgcc
caggagatcttcatcaccaactcgcagtcccagtcctacctgatcgagagcctgaacggc
atcgaggcgctgaaggcgaccagcaacgaatacttcgcccgcgcccggtgggagaacgcc
ttcgtcgagaacgtcaaccggagcttccgccagcagaagctcagcctgatgtccaacagc
ctgttcaagctcgccacgctggcgtcgagcatcgccgtgctgtggatcggcgccacccag
gtgatgagcggggaaatgagtatcggcgagctgatgggcttcaacatgctgatgggcctg
gtcaccggcccggtcacccagatggtcaacctgtggaacgagcttcaggaggtccgcatc
gcgatcgaccgcgtcggcgacgtgctgaacgtgaagtcggagcacgtgaccgtctccgcc
ccggacaagatccagacccaggtccgcaacctggagggcgagatcaagttcgagcaggtc
aatttcagctacaacaccaacgaccagaagcggtcggtcatgcacggcttcgacctgacc
atccatccgggcgagcacgtcgccttcgtcggcccgtcgggctgcggcaagagcacgatc
gccaagatggtgctgggcttctacaagccggcctccggcgacctgatgatcgacggcaag
gacatccggaccatggacctcaactcgctgcgccggaacatcggcgtggtgctccaggac
accttcatcttcggcggcaccgtggccgagaacatcgcgctcggcgacccggagccggac
atgcaggcggtgcaggaggcggcgaagctggcggggtccgaggacttcatcatcaacttc
cccctgggctaccagacccggatcggcgagaagggcatgggcctgtcgggcggccagcgc
cagcgcatcggcatcgcccgcgccctctaccgccggcccaagatcatgatcttcgacgag
gcgaccagcgcgctcgacaacgagtccgaggcccgcatcacccaggagctgaaaggcgtc
ctggtcaaccgcacctcgatcaccatcgcccaccgcctgaccaccgtgatggacagcgac
cgcatctgcttcatcaaggacggcaaggtccaggaacaaggttcccacacccagctcacc
gatcccgaattcctcaaggagaacggctacaccggcctctactaccagctcgcccggacc
cagttcgacctgcccccgctggagctgaaatga
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