Skermanella mucosa: JL100_035915
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Entry
JL100_035915 CDS
T07652
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_035915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_035915
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JL100_035915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UEM25171
LinkDB
All DBs
Position
pSM-3:complement(201806..203707)
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AA seq
633 aa
AA seq
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MPILRTIACAAVALLIGTTAYAPSAQSQDVVSSLPRKETLILENPEGTIKNPGWFNIWAI
NAGGQYTGLQQLAMDTLWYIDPEKGLDGPIDNSLASEPPKYNADFTEMTVKLRPGIFWSD
GVEFTADDVVYTVETQMKNTGMRWGPLLSLNVESVQAPDPQTVVFKLKRPNSRFHALFTV
RFNAIWIMPKHVFEQAPDPMRFDFNKPVSLGAYALHSFDPQGKWFIWQRRDDWQRTTLGR
FGEPGPKYAVYMDAGPPDKRVIAQMNHNLDVVHDVAPEGMFTLAKQSKSSRGWFKDFPYA
HPDPTLPALLFNHQRPEFQDRDVRWALALLIDIKAVSMASYRGAATISAIGIPPTGTHPD
DYHIPMQDWLKSFELDTGKRKIKPYDPTIGKQIADMLRPSMKEQIPTDQASIDRSFGMGW
WKPNPQAAQELLQKAGYTKRGSSWYTPDGKPFSIRVMVEGESRPVITRAGTMIAQQWRQF
GIDAKTDLAQGTMLDRRNAGDFDTLISWSVESYGGHPDLAYFLDSWHSDYVAAPGKMQAP
RNYMRWASPELDGIIEKIRGVSFDDPRSIELGREYVKLAVREMPIIPLMAYNVFVAMDDT
YWTGYPTAEDPYANPVPNWGNSRYMMVRLKPSE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcccattctcagaacgatcgcgtgcgccgccgtcgcccttctcatcggcacgaccgcg
tatgctccgtccgcccagtcgcaggacgtcgtctccagcttgcccaggaaagaaacgctg
atcctggagaacccggaagggacgatcaagaatccgggctggttcaacatctgggccatc
aatgccgggggccagtacaccggtcttcaacagcttgccatggacactctgtggtacatc
gaccctgaaaaaggcctcgacgggccgatcgacaactccctggcatccgagcccccaaag
tacaacgccgatttcaccgagatgacggtgaaactgcggcccgggatcttctggagcgac
ggggtcgaattcacggccgacgacgtggtctacaccgtcgaaacccagatgaagaacacc
ggcatgcgctggggtccgctgctctccctcaacgtggagagcgtgcaggcgcccgatccg
cagaccgtcgtcttcaagctgaagcggccgaactcccgtttccacgccctcttcacggtg
cgcttcaacgcgatctggatcatgccgaagcatgtgttcgagcaggcgcccgacccgatg
cggttcgacttcaacaagccggtgtcgctcggggcctatgcgctgcacagcttcgatccc
cagggcaaatggttcatctggcagcgccgcgacgactggcagcgcaccacgctgggtcgc
ttcggcgaaccgggaccgaaatatgccgtctacatggacgccggcccgccggacaagcgc
gtcatcgcgcagatgaaccataatctcgacgtcgtccacgacgtggcgccggagggcatg
ttcaccctggccaagcagtcgaagtcctcgcgcggctggttcaaggacttcccctacgcc
caccccgacccgacgctgcccgccctgctgttcaaccaccagcggcccgagttccaggac
cgcgacgtgcgctgggcgctggccctgctgatcgacatcaaggccgtctccatggcctcg
taccggggggccgcgaccatctcggcgatcggcatcccgccgaccggcacccaccccgac
gactaccacatcccgatgcaggactggctgaagtcgttcgagctggataccggcaagcgg
aagatcaagccgtacgatccgactatcggcaagcagatcgccgacatgctgcgcccttcc
atgaaggagcagatcccgaccgaccaggcgagcatcgaccgctcgttcggcatgggctgg
tggaagcccaatccccaggcggcgcaggaactgctgcagaaggcgggatacaccaagcgc
ggcagcagctggtacacgccggacggcaagcccttctcgatccgggtcatggtcgagggt
gaatcccgcccggtgatcacccgcgccggcaccatgatcgcccagcaatggcgccagttc
ggcatcgacgccaagaccgacctcgcccagggcaccatgctggaccggcgcaacgccggc
gacttcgacacgctgatcagctggagcgtcgagagctacggcggccaccccgacctggcc
tatttcctcgacagctggcactcggactacgtggccgctccgggcaagatgcaggctccg
cgcaactacatgcgctgggcgtcgcccgagctggacgggatcatcgagaagatccgcggc
gtctcgttcgacgatccgcgctcgatcgagctcggccgcgaatacgtcaagctggcggtg
cgggagatgccgatcatcccgctgatggcctacaacgtgttcgtcgccatggacgacacc
tactggaccggctacccgaccgccgaggacccctacgccaacccggtgccgaactggggc
aattcccgctacatgatggtccgcctcaagccgagcgaataa
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