Skermanella mucosa: JL100_036065
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Entry
JL100_036065 CDS
T07652
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_036065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_036065
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JL100_036065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
CysA_C_terminal
AAA_21
AAA_22
ABC_ATPase
nSTAND_NTPase5
AAA_29
AAA_16
nSTAND3
AAA_25
AAA_23
nSTAND1
AAA
DO-GTPase2
OB_MalK
AAA_28
AAA_27
AAA_19
NB-ARC
AAA_14
DLIC
Motif
Other DBs
NCBI-ProteinID:
UEM25198
LinkDB
All DBs
Position
pSM-3:240161..241213
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AA seq
350 aa
AA seq
DB search
MTSITLNEVSKHYGPFRAVDGIDLEVRQGEFVTILGPSGSGKTTVLSMIAGLNHPTRGSI
WLGGRDVTWMKAAERNVGLVFQSYALFPHMTVFDNVAFPLTVRNVSKADIRTRVDRALAV
VRLDGFQKRKPQQLSGGQQQRVALARAIVFQPDILLLDEPLGALDRKLREEVQVELRHLQ
RTLGITTILVTHDQEEALSLSDRIVVLSEGRVQQIATPQDAYLKPRTRFVAEFLGTANLF
EGRLEQGGTLALADGSRLAAPSSDLPAGAAVVAIVRPERIQLDDSEEGGRDGVPAVIEDM
VYLGQSIRYHLRRPDGQGAVVLSLDRGGRFGPGQPVRLNWQPEDVWIIPG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgataacgctgaacgaggtctcgaagcattacgggcctttccgcgccgtcgac
ggcatcgacctggaggtgcggcagggggaattcgtcaccatcctggggccgagcgggtcg
ggcaagaccacggtcctcagcatgatcgccggcctcaaccacccgacccgcggcagcatc
tggctgggcgggcgcgacgtgacctggatgaaggcggcggagcggaacgtcgggctggtg
ttccagagctacgccctgttcccgcatatgacggtcttcgacaacgtcgcgttcccgctg
acggtgcgcaacgtgtcgaaggcggacatccgcacccgcgtggaccgggcgctcgccgtc
gtccggctggacgggttccagaagcgcaagccgcagcagctttccggcgggcagcagcag
cgggtggcgttggcccgggcgatcgtgttccagccggacatcctgctgctcgacgaaccg
ctcggcgcgctggaccgcaagctccgcgaggaggtgcaggtcgagctgcggcacctccag
cgcacgctcggcatcaccacgatcctggtgacccacgaccaggaggaggcgctgtccctc
tccgaccggatcgtcgtgctgagcgagggcagggtgcagcagatcgctaccccgcaggac
gcctacttgaagccgcggacccgcttcgtcgccgagttcctggggaccgccaacctgttc
gaggggcgcctggaacagggcgggacgctggcgctggccgacggctcccgcctggcggcg
ccgtcctcggacctgccggccggcgccgccgtcgtggcgatcgtccggccggagcgcatc
cagctcgacgactcggaggagggcggccgggacggcgttcccgcggtcatcgaggacatg
gtctatctcggccaatccatccgttatcatctccgccgccccgacggccagggcgcggta
gtcctgtccctggaccggggcggccgcttcggccccggccagccggtccgcctgaactgg
cagccggaggatgtctggatcatcccggggtga
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integrated database retrieval system
