Stenotrophomonas muris: ACUVWM_13050
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Entry
ACUVWM_13050 CDS
T11372
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
smud Stenotrophomonas muris
Pathway
smud00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smud00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ACUVWM_13050 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smud01007
]
ACUVWM_13050 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smud03016
]
ACUVWM_13050 (serS)
Enzymes [BR:
smud01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
ACUVWM_13050 (serS)
Amino acid related enzymes [BR:
smud01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ACUVWM_13050 (serS)
Transfer RNA biogenesis [BR:
smud03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ACUVWM_13050 (serS)
Prokaryotic type
ACUVWM_13050 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Cep57_CLD_2
CENP-F_leu_zip
ATG16
DUF7835
Motif
Other DBs
NCBI-ProteinID:
YAJ68812
LinkDB
All DBs
Position
complement(2787187..2788587)
Genome browser
AA seq
466 aa
AA seq
DB search
MLDPALLRHQPADLAERLRTSRGFELDVSALESLEADRKRIQVRTQELQSLRNSRSKAIG
QAKAKGEDVSAIMAEVAAFADELKASEVALDELREKIEAISMGIPNLPADDVPAGADEND
NVEQARWGTPRQFDFKVLDHVELGARNGWLDGETAAKLSGSRFTVLRGPIARLHRALAQF
MVDLHVDEHGYMELNVPVIVNADSLRGTGQLPKFEDDLFATFKLPDEHTKAKFVAEFSDW
EDLKSAAQSNELRALHSLDGIIQSHKDRYLIPTAEVPLTNTVRGEILDLECLPLRMTAHS
LCFRSEAGSGGRDVRGMIRQHQFEKVELVSISRPEDSDAEHQRMTRCAEVVLEKLGLPYR
KVLLCTGDMGFSAVKTYDLEVWLPSQETYREISSCSNCGDFQARRMQARWRNPATGKPEL
AHTLNGSGVAVGRAMIAVMENYQNADGSITVPEALRPYMGGLETIG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatccagccctgctccgccaccagcccgccgacctcgccgaacgcctgcgcacc
agccgcggcttcgagctcgacgtgtctgccctggagtccctggaggcggatcgcaagcgc
atccaggtgcggacccaggagctgcagagcctgcgcaacagccgttccaaggccatcggc
caggccaaggccaagggcgaggacgtctcggccatcatggccgaggtcgctgccttcgcc
gacgagctgaaggcttcggaagtggcgctggacgagctgcgcgagaagatcgaagcgatc
tcgatgggcattccgaacctgccggccgacgacgtgccggcaggtgccgacgagaacgac
aacgtcgagcaggcgcgctggggtaccccgcgccagttcgatttcaaggtgctcgaccac
gtcgaactgggcgcccgcaacggctggctggacggcgagaccgcggccaagctgtccggc
tcgcgcttcaccgtgctgcgtggcccgatcgcgcgcctgcaccgcgccctggcccagttc
atggtcgacctgcacgtcgatgaacacggctacatggagttgaacgttccagtgattgtg
aatgcggactcgctgcgtggaaccggtcagctgccgaagtttgaggacgatctgtttgct
acttttaagctccctgacgagcatacgaaggctaaatttgttgcggaattcagcgactgg
gaagacttgaaatctgctgcccagtcaaacgaattgcgtgcgctacactcgctggatgga
atcatccagagccataaggatcgatatctcatccccactgccgaagtgccgctgactaac
actgtgcgtggtgagattctcgacttggagtgcttgccgctgcgcatgaccgcgcactcg
ctgtgcttccgttccgaggctggcagcggtggccgcgacgtgcgcggcatgatccgccag
catcagttcgagaaggtcgagctggtctcgatcagccgcccggaagacagcgacgccgaa
caccagcgcatgacccgctgcgccgaagtggtgctggaaaagctgggcctgccgtaccgc
aaggtgctgctgtgcaccggcgacatgggcttctcggcggtgaagacctacgacctggaa
gtctggctgccgtcgcaggaaacttaccgcgagatttcctcgtgctcgaactgtggtgac
ttccaggcccgccgcatgcaggcgcgctggcgcaacccggccaccggcaagccggagctg
gcgcacacgctgaacggctcgggcgtggccgttggccgcgcgatgatcgcggtgatggag
aactaccagaacgccgacggcagcatcaccgtgccggaggccctgcgcccgtacatgggt
ggcctggaaaccattggctga
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