Stenotrophomonas muris: ACUVWM_18030
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Entry
ACUVWM_18030 CDS
T11372
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
smud Stenotrophomonas muris
Pathway
smud00300
Lysine biosynthesis
smud00470
D-Amino acid metabolism
smud01100
Metabolic pathways
smud01110
Biosynthesis of secondary metabolites
smud01120
Microbial metabolism in diverse environments
smud01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
smud00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACUVWM_18030 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACUVWM_18030 (dapF)
Enzymes [BR:
smud01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACUVWM_18030 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
YAJ69768
LinkDB
All DBs
Position
complement(3915614..3916465)
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AA seq
283 aa
AA seq
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MSKAGSRALRFSKMHGAGNDFVVIDLRDGTAPPTPELAARLADRHTGVGCDQILTIEAPR
ADGSVASYRIWNADGSNSEQCGNGARCIAAWLVREGSAQGDAFVIDSPLASHEVKVLGEG
QFAVTMGVPAFEPANVPLMGFAHAREEYLLPLQGESVRFAAVSMGNPHAVIEVGLVDAAP
VERVGALLQQHASFPRSVNVGFAQVMSPAHARLRVFERGVGETLACGSGACAAAVTLMQR
GRLQRDARISLPGGDLRIQWPGDGQPVVMAGPTAFVFEGEWIA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggccggttccagggccctgcgtttcagcaagatgcatggcgcgggcaatgat
ttcgtagtgatcgacctgcgtgacggcaccgcaccgcccacgcccgagctggccgcgcgc
ctggccgaccgccacaccggcgttggctgcgaccagatcctgaccatcgaggcaccgcgt
gcggacggttcggtggcctcgtaccgcatctggaatgccgacggctccaattccgagcag
tgcggcaacggcgcgcgctgcatcgccgcctggctggtgcgcgagggcagtgcgcagggc
gatgcattcgtcatcgacagcccgctggccagccatgaagtgaaggtgctgggcgaaggg
cagtttgcggtgacgatgggcgtgcccgccttcgagccggccaacgtgccgctgatgggc
tttgcgcacgcgcgcgaggaatacctgctgccgctgcagggcgagagcgtacgcttcgcc
gcggtgtcgatgggcaacccgcatgcggtgatcgaagtgggcctggtcgatgctgcaccg
gtcgagcgcgtcggtgcgctgctgcagcagcatgcgtcgttcccgcgctcggtgaacgtg
ggcttcgcccaggtgatgagcccggcccacgcccgcctgcgcgtgttcgagcgcggtgtc
ggcgagaccctggcctgcggcagtggtgcctgtgccgccgcggtgaccctgatgcagcgc
ggtcgcctgcagcgcgatgcccgcatcagcctgcccggtggcgacctgcgcatccagtgg
ccgggcgatggccagccggtggtgatggcgggcccgaccgcattcgtcttcgaaggggag
tggatcgcatga
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