Stenotrophomonas muris: ACUVWM_20895
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Entry
ACUVWM_20895 CDS
T11372
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smud Stenotrophomonas muris
Pathway
smud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACUVWM_20895 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smud03400
]
ACUVWM_20895 (xth)
Enzymes [BR:
smud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACUVWM_20895 (xth)
DNA repair and recombination proteins [BR:
smud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACUVWM_20895 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
YAJ70306
LinkDB
All DBs
Position
complement(4497290..4498057)
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AA seq
255 aa
AA seq
DB search
MKIASWNVNSLNVRLPHLEQWLREFGPDIVGIQETKLEDHKFPDSALIAAGYRSVFAGQK
TYNGVALLSREPAQDVQIGIPGFEDEQKRVIAGTFGDLRVINLYVVNGQDIGTDKYDYKL
RWLEAVHAWIAEELQRHPKLIVMGDFNIAPDARDVHDPAVWNDNHILTSTAERGALNKLL
QLGLHDGFRLHNDEAGTFSWWDYRAAGFRRNLGLRIDLTLVSEALKGSAVASGIDREPRT
WERPSDHAPAWVQIG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcctcgtggaacgtcaattcgctcaatgtccgcctgccgcacctggagcaa
tggctcagggagttcggcccggacatcgtcggtatccaggaaaccaagctggaggaccac
aagttccccgattcggcgctgatcgccgcaggctatcgcagcgtgttcgccggccagaag
acctacaacggcgtggcgctgctgtcgcgtgagccggcgcaggacgtgcagatcggcatt
cccggtttcgaggacgagcagaagcgcgtcatcgccggcacctttggcgacctgcgggtg
atcaacctgtacgtggtcaacggccaggacatcggtaccgacaagtacgactacaagctg
cgctggctggaagcggtgcatgcctggatcgccgaagagctgcagcgccacccgaagctg
atcgtgatgggcgacttcaacatcgccccggacgcgcgcgacgtgcacgacccggcggtg
tggaacgacaaccacatcctgacctccaccgccgagcgcggcgcattgaacaagctgctg
cagctgggcctgcacgatggcttccgcctgcacaacgacgaggcgggtaccttcagctgg
tgggactaccgtgccgccggcttccgccgcaacctgggcctgcgcatcgacctgaccctg
gtctcagaggcgctgaagggcagtgcggtggcctcgggcatcgaccgcgagccgcgcacc
tgggaacgcccgagtgaccatgcgccggcctgggtgcagatcggttga
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