Sphingobacterium multivorum: I6J00_01570
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Entry
I6J00_01570 CDS
T07579
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
smui
Sphingobacterium multivorum
Pathway
smui03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6J00_01570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smui03400
]
I6J00_01570
Enzymes [BR:
smui01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
I6J00_01570
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
I6J00_01570
DNA repair and recombination proteins [BR:
smui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I6J00_01570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Ribosomal_S13
UAE_UbL
HNOB
Motif
Other DBs
NCBI-ProteinID:
QQT45402
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All DBs
Position
complement(368296..369069)
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AA seq
257 aa
AA seq
DB search
MPELPDLQAFSKNLTKMLKGKVLEKAAIHNKQKTKVSLNDLQTLEGKKLIKVYREGKRLF
FDFGKDAILSIHLMLHGKLIYSEDENPKYALVSMKFKDGGTLSITDFQKMAHIELNPEHA
KVMDALSEKLNPKLLFGLLQSSKAKIKTLLMDQNVIGGIGNAYADEILYEAGISPLSISN
KIPEKQVQHLAKAIKEVLENAEQQILKEHPEIINGEIRDFMKVHNKNAKVDGKGHEILQT
KISGRTTYYTEQQKVFE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagacctacaggccttcagcaaaaatctcacaaaaatgcttaaaggt
aaagtgcttgaaaaagctgccattcacaacaaacaaaagaccaaagtcagcctgaatgat
ctgcaaactcttgaaggcaaaaaactcatcaaagtttatcgggaaggtaaaaggcttttt
tttgattttggcaaagatgctatcttgtcaattcatctcatgttgcatggcaaactgata
tattcggaggacgaaaacccaaagtatgcattagtttccatgaagtttaaggatggtgga
acgctatccattaccgactttcagaagatggcacatatagaattgaatcctgaacatgca
aaggtgatggatgcactttctgaaaagctaaatccaaaattacttttcggattgctgcaa
tcaagcaaggccaaaattaaaactctcctgatggaccaaaatgtcattggtggtattgga
aatgcctacgctgacgaaatcctgtatgaagcagggatatcaccactttcaatttcaaac
aaaattcccgaaaagcaggtacaacatcttgccaaagcaattaaggaagtactggaaaat
gccgaacagcagattctaaaagagcatcctgaaatcattaacggtgagataagggacttc
atgaaagtccataacaaaaatgcgaaggttgatggtaagggtcatgaaatattgcaaacc
aaaattagcggcagaactacttattacacagagcaacaaaaagttttcgaatag
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