Sphingobacterium multivorum: I6J00_04115
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Entry
I6J00_04115 CDS
T07579
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smui
Sphingobacterium multivorum
Brite
KEGG Orthology (KO) [BR:
smui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smui03032
]
I6J00_04115
03400 DNA repair and recombination proteins [BR:
smui03400
]
I6J00_04115
Enzymes [BR:
smui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I6J00_04115
DNA replication proteins [BR:
smui03032
]
Prokaryotic type
DNA Topoisomerases
I6J00_04115
DNA repair and recombination proteins [BR:
smui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6J00_04115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QQT45868
LinkDB
All DBs
Position
929454..930413
Genome browser
AA seq
319 aa
AA seq
DB search
MKARTGYTRRKVGKSFKYFDASEKEVSDKKILERIAKLVIPPNWTDVWIAKSSKSDLQAF
GFDQKGRKQYIYHSKFVGQRQAAKFSNILYMGKYLQELRNISSKHLKHEFWDMDKLCAVA
FKIMDSTLIRIGNKRYTLTNKSYGLSTLEKRHVSIEGNQISLAYKGKKGVFQQKSWTNKQ
QAKLLEELLKMKGKRIFQMDSASCESTFCGSAFNQYLRKNCTGEISCKSIRIWGASREAF
YQLAQIKQAESLSARKRQLNSVIKKVAEQLGNTKSVSQTYYIHPAIQQVFMEAKFPFIKD
KLPLAKLEERVFRFLRKHG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagaacggggtatacaagaagaaaagtaggtaagtcttttaaatatttcgac
gcttcggaaaaggaagtgtccgataaaaagattttagagcggatcgcaaaactcgttatt
ccaccaaattggacagatgtttggatcgctaaaagctcaaaaagcgatttacaggctttt
ggcttcgaccaaaaaggacgcaaacaatatatctatcattccaaatttgtcggccaacgg
caagctgcaaagtttagcaatatcctctatatgggtaaatacttacaagagttgagaaac
atcagttccaaacacctcaaacacgaattttgggacatggataaactttgtgcagttgct
tttaaaataatggacagtacattgattcgtattggcaataagcgttatacactgacaaat
aaatcgtatgggctgagtactttggaaaaaagacacgtcagcattgaaggcaatcagata
tcgctagcctataaaggtaaaaagggggttttccagcagaaatcctggaccaacaaacaa
caagctaaacttttggaagaattactaaaaatgaaaggcaaaaggatattccaaatggat
agtgcaagttgcgaaagcactttctgtggctccgcttttaatcagtatctgcggaagaat
tgtacaggtgagatcagttgcaagagtattcgcatttggggcgccagtcgtgaagccttt
tatcagcttgcgcaaataaaacaggcggaatcactcagtgcacggaaaagacaattaaat
agcgtcatcaagaaggttgcagagcaacttggtaatacgaagtctgtttcgcagacttat
tatatccatccggccatacaacaggtatttatggaagcaaagttcccctttataaaagat
aaattaccactagcgaagcttgaagagagagtattccgatttttacgtaagcatggctaa
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