Sphingobacterium multivorum: I6J00_11955
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Entry
I6J00_11955 CDS
T07579
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smui
Sphingobacterium multivorum
Pathway
smui03030
DNA replication
smui03430
Mismatch repair
smui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J00_11955 (dnaE)
03430 Mismatch repair
I6J00_11955 (dnaE)
03440 Homologous recombination
I6J00_11955 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smui03032
]
I6J00_11955 (dnaE)
03400 DNA repair and recombination proteins [BR:
smui03400
]
I6J00_11955 (dnaE)
Enzymes [BR:
smui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J00_11955 (dnaE)
DNA replication proteins [BR:
smui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J00_11955 (dnaE)
DNA repair and recombination proteins [BR:
smui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J00_11955 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
GLUCM-like_C
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
QQT47315
LinkDB
All DBs
Position
complement(2729698..2734116)
Genome browser
AA seq
1472 aa
AA seq
DB search
MYIIFDTETTGLPKRWDAPITDTDNWPRCIQLAWQIHDEMGNLVEHHDFLIKPDGFDIPY
DSEKIHGISTALAEEQGLPLQEVLEKFNVALNKAKFVVGQNIGFDLNIMGCEFYRYGVAS
NMANMPVLDTCTEVTAELLKIPGGRGGRFKLPNLTELHSYLFGVPFAEAHNATADVEATT
RCFLELVRREVFTAEELQVDTGYFVDFKTNNPGPIPTVGLKHINLKAASDEIRKRSQPDE
VKVVVDADALAALKDAKFAHLHNHSQFSILQSTMSYDKLVSAAVKDNMPAVALTDHGNMM
GAFEFVSRVIGHNKEVEAQNAEAVENGEEPTGQLLKPIVGCEFFVCENHKDKSRKDNGYQ
IVLLAKNKRGYHNLAKLASFAYTSGFYYVPRIDKDLILQYKEDVIALSGNLQGEVPNKIL
NIGESQAEEALLWWKEQFGDDFYLELMRHGQEDEDRVNQTLLKFSRKYQVKVVATNNTYY
EKKGDAHAHDILLCVKDGEKLSTPKGRGRGFRFGLPNQEYYFKSSDEMKALFKDLPEAIL
NIQEIVDKVEIFKLNRDVLLPKFDIPEEFQVEADLEDGGKRGENKYLAHLCYVGAEKRYE
EITDDIRERLDFELATIEKTGYPGYFLIVQDFIAAARDMGVSVGPGRGSAAGSAVAYCLG
ITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMQYVINKYGASQVAQIITYGT
MAAKSSIKDTARVLDLPLGDANEIAKLIPNLKLSKIFTLDDAGLREKLRTEEIEAVNRLK
SIADGAGLEAETIRQARVLEGSVRNTGIHACGVIITPDDITNFVPVSLAKDSDLYVTQFD
NHVVESAGLLKMDFLGLKTLTLIKDTVENVKLSHGIVLDPDQFPIDDELTYELFQRGETI
GVFQYESPGMQKYMRDLKPTVFADLIAMNALYRPGPIEYIPSFIKRKHGIDPIVYDLDAC
EEYLKETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKQKAVLDKMKPKFVSQAEE
KGHNAKVLEKIWTDWEAFASYAFNKSHSTCYAWVAYQTAYLKAHFPAEYMAAVLSNNMND
IKQVTFFMEECKRMGLQVLGPDVNESYYKFTVNESGAIRFGIGAVKGVGAGAVDAIVQTR
QSGLYKSVFDMAKRIDLRAVNKKAFESLAYAGGFDSFENTHRAQYFHSDENSTGMEKAIR
FGQRFKENESSAQASLFGVGGAAELPEPVLAPCPQWGLIEKLKYEKDVIGIYLTSHPLDT
YRFEIEHFCQNSVSDLALINKVKAAEVDEETLLEFNRIKNKELVIGGIIASANHRLTKTG
KPFASFIIEDYSDSYDMAVFGEEYVKLKGYLQEGYFVQLRGLVQERFRQVGNWGFELRSV
QLLSDLREKMAKSFTINIPLPKLNEAFLDGIKDILAQNEIEGVVPNCQLKFKIWDPQDEI
SVEMPAKSLKINLTNEFLDCIDKFEGINYRLN
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgtatattattttcgatacggaaacgacgggtttgcctaagcgttgggacgcaccaatt
accgatacggacaattggcctcgctgtattcaattggcttggcagatccatgatgagatg
ggaaatttggtcgaacatcacgatttcttgattaagccagatggatttgatataccctat
gactctgaaaaaatacacggcatatcgactgcattggccgaagaacagggattgccgctt
caggaggtcctagagaaatttaatgtggcattgaataaagccaagtttgttgttggacaa
aatattggttttgatttgaatatcatgggctgtgaattttaccgttatggtgttgcgtcc
aatatggctaatatgcctgtattggatacctgtacggaagtaacagctgaactgctgaaa
attccaggcggtcgcggtgggcgttttaaattacccaatttgaccgagctgcattcttat
ttattcggggtgccgtttgctgaggcacataatgcaacagccgacgttgaggcgacaaca
cgttgttttctggagcttgtcagaagagaggtattcactgccgaagaacttcaggtcgat
acgggctactttgtcgattttaaaaccaacaacccggggcctatacccactgttggactg
aaacatatcaacctaaaagcagcttctgatgaaattagaaaacggtctcagccagatgaa
gtcaaggttgtcgttgatgcggacgcgttagcagctttaaaggatgccaaatttgcccat
ttacataaccactctcagttttcgatcctgcagtcgacgatgtcgtacgataagttagtt
tcggcagcggtcaaggataatatgcctgctgttgcgttaacggatcacggaaatatgatg
ggggcttttgagtttgtttctcgtgttataggccataataaagaagttgaagcacaaaat
gcggaggcagttgagaatggagaggagcctactggtcagcttttaaagccaattgttggt
tgtgagttttttgtttgtgaaaaccacaaagataagtccaggaaggataatggttatcag
attgtgttattggcgaaaaataaacgcgggtaccataatctggctaaactggcttctttt
gcttatacgtctgggttctattatgttccgcggattgataaagatcttattcttcaatac
aaggaagatgttattgcgctgtcaggtaacttacagggggaggtgccgaataaaatactg
aatattggtgagagccaggccgaagaagctttgctgtggtggaaagaacaatttggggat
gatttttacctggaattgatgcgtcatggtcaggaagatgaggatcgtgtgaatcaaacc
ttgctgaagttttcccgcaaatatcaggtcaaagttgttgcgaccaataatacatattac
gagaagaaaggcgatgcacatgcgcatgatattttgctctgtgtgaaagatggtgaaaag
ctatcgactccaaaaggtaggggacgtggattccgttttggtttacccaatcaggaatat
tatttcaaatcttcagatgaaatgaaggccctttttaaagatttgcccgaagcgattcta
aatattcaggagattgtcgataaggtagagatatttaagttaaaccgcgatgtcctatta
cctaaatttgatattcctgaggaatttcaggtggaagccgatcttgaagatgggggaaaa
cgtggtgaaaataaatacctggcgcatctttgttatgtgggggctgagaagcgttatgag
gaaataacagatgatattcgcgaacgtcttgactttgagttggctaccattgagaaaacg
gggtatccggggtactttttgattgttcaggattttattgcggcggcccgggatatggga
gtttccgtggggccaggacggggatctgctgctggttcggcagtagcttattgtttggga
attaccaatatcgatccgattaaatatgacttgctttttgagcgtttcttaaatcccgac
cgtgtgtccatgcctgatattgatatcgattttgatgacgagggacgtggacgtgtcatg
caatatgtaatcaataaatatggtgctagtcaagttgcccagattattacctatggtaca
atggcagcaaagtcatccatcaaagatacagcgcgtgtattggacttacctttgggtgat
gccaatgaaattgccaagctgattccgaaccttaaattatccaagatttttactttagat
gatgccggtttaagggaaaagctaaggactgaggaaattgaagccgtcaatagattgaaa
tctattgcggatggtgctggattggaagcggaaacgatcagacaggcccgggttttggag
ggttctgtacgaaatacaggtatccatgcctgtggtgttattattacaccagacgatatt
actaatttcgttcctgtttctttggcaaaagactctgatctttatgtgacgcagttcgat
aaccacgttgttgaaagtgccggtttgctgaaaatggactttttgggtttaaagacactg
acactgattaaagatacggtagaaaatgtcaaattaagtcatggtattgtgctggatccg
gatcagtttccgatcgacgatgagcttacgtatgagctctttcagcgtggagaaaccata
ggggtgttccagtatgaatctcctggaatgcagaaatacatgcgcgaccttaagccgaca
gtatttgccgatttgattgcgatgaatgcactctatcgtccgggaccaatcgaatatatt
ccaagttttattaagcgtaagcacggtatagaccccattgtttacgatttggatgcttgt
gaggaatacctcaaggaaacctacggtattacagtctaccaggagcaggttatgctcttg
tcccagaagcttgcgggattttcaaaaggtgatgccgatgtcttgcgtaaggctatgggt
aagaagcaaaaggctgtactcgataagatgaagccgaagtttgtttcgcaggcagaggag
aaagggcataatgcaaaagttctggagaagatttggaccgactgggaagcttttgcgagt
tatgcatttaataaatcccactcgacctgttatgcttgggttgcttatcagaccgcttat
ttaaaagcgcattttcctgcggaatacatggctgcggtactttccaataacatgaatgat
atcaagcaggtgacattctttatggaggaatgtaaacgaatgggcttgcaggtattgggg
ccagatgtgaatgaatcctattataagtttacggtaaatgaatctggagctattcgtttt
ggaataggtgcggtgaaaggtgttggggcaggagcggtagacgctatcgtgcaaacacgg
caatcaggattgtataaatctgtttttgatatggctaaacgaatcgatcttcgtgcggtc
aacaagaaagcttttgagagtctggcttatgctggaggctttgatagttttgagaatacg
caccgtgcacaatattttcattcggatgaaaattcaacaggaatggaaaaggcgatccga
tttggccagcgctttaaggaaaatgaaagttcggcccaagcgagcttgtttggtgtagga
ggggctgcagaattgcctgagccggttttggcgccatgtccgcaatggggattgattgaa
aagcttaaatatgaaaaagatgttatcggtatttatctgaccagtcaccccttggatacc
taccggtttgagattgaacatttttgtcagaattcggtgtcagatttggccttgatcaat
aaggttaaggcggcagaggtcgatgaagagactttgcttgagtttaatcggatcaagaac
aaagaattggtgattggtggtattatcgcatcggcaaaccatcgattgacgaagacgggt
aagccttttgcgtcatttatcatcgaggattatagtgattcttatgatatggcagttttc
ggtgaagaatatgtcaagttgaagggatatttgcaagagggatattttgtgcaattgcgg
ggtttggtacaggagcgtttcagacaggttggaaattggggctttgagctacgcagtgtg
cagttgctttcggatcttcgtgagaagatggcgaagagttttacgatcaatattccttta
cctaagttgaacgaagcatttcttgatggtatcaaggatatactggcgcaaaatgagatc
gagggagttgtgccaaattgtcaattaaagtttaaaatctgggatccccaagatgaaata
tctgtcgaaatgccagctaaaagtctgaaaataaacctaacaaatgaatttttggactgt
atagataagtttgaagggataaattaccgattgaattag
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