Sphingobacterium multivorum: I6J00_14490
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Entry
I6J00_14490 CDS
T07579
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
smui
Sphingobacterium multivorum
Pathway
smui03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6J00_14490 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smui03400
]
I6J00_14490 (uvrA)
DNA repair and recombination proteins [BR:
smui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J00_14490 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6J00_14490 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
DnaJ_CXXCXGXG
AAA_29
RsgA_GTPase
nSTAND3
AAA_23
Viral_helicase1
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QQT42978
LinkDB
All DBs
Position
3322085..3324925
Genome browser
AA seq
946 aa
AA seq
DB search
MAVKRSPDLGEQSEVQVFGARAHNLKNIDVSFPRNELVVITGLSGSGKSSLAFDTIYAEG
QRRYMETFSAYSRQFLGGMERPDVDKISGLSPVISIEQKTTSKNPRSTVGTITEVYDFMR
LLFARAGEAFSYVTGKKMERMSDDQVIERILTEFEGQALNILAPVVKGRKGHYRELFEQI
RKQGYVKVRVDGEILDLVPKMQVDRYKIHDIEIVVDRLKVEREDKKRLQTSVMQAMKTAK
GIIKVSTKDNQEQFYSRYLMDAESGISYDEPQPNTFSFNSPYGACPTCDGLGYIFEIDKN
AVIPDKKLSIQKGGLAPLGPTRENWTSEVLKAVAKKLDFTITTPLEKLTEEQIDQLLFGN
KEEPIVVTVSYGSYGTREYRVEFEGIFKMLEEFSGKSSDEAPSLDDFRTKVTCPTCAGAR
LKKESLHFKIADKNIHELSTMDITSIKEWFDQVESKLDERQLIIATEILKEIRARLGFLL
DVGLNYLTLDRTAKTLSGGEAQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINAL
KNLRDIGNSVLVVEHDKDMILHADHVIDMGPAAGVHGGTVVAEGTPTEILKSNSLTAAYL
NGTKEVKIPEKRREGNGKTLSLHGATGHNLKNLSVSFPLGKLIVVSGVSGSGKSSLITGT
LYPILNKHFFRAKAIPLPFKKIEGLEHIDKVIEIDQSPIGRTPRSNPSTYTGVFSDIRTL
FVQLPEAKIRGYKPGRFSFNVKGGRCETCQGAGLKVIEMNFLPDVQVPCETCHGKRYNRE
TLEVRYKGKSISDVLDMSINDAVDFFENVPSIYRKIKTLQDVGLGYITLGQSSTTLSGGE
AQRVKLATELSKKDTGNTFYILDEPTTGLHFEDVNVLMGVINRLVERGNTILIIEHNLDV
VKSADWVIDIGPEGGKDGGQVLFEGTPENLIKNNKSETARFLKLEM
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaaaagaagcccagatttgggcgaacaaagtgaagttcaggtatttggagcg
cgtgcgcataatctaaaaaatatagatgtttcttttccgagaaatgaattggttgttatc
acaggtttaagtggcagcggaaagtcttccttggcttttgacaccatttatgccgaagga
caacgtcggtatatggagacattcagtgcctacagccgtcagtttttgggcggcatggaa
cgtccggatgtggacaagatatcgggcttaagtccagtgatctccattgaacagaaaacc
accagcaaaaacccgaggtccactgttggaaccattactgaggtgtatgactttatgcgt
ctactatttgcccgagcaggagaagctttctcctatgtgactgggaagaaaatggagcgt
atgtcggacgatcaggttatcgaacggattttgactgagtttgaaggacaggcactgaac
atcctggcaccagtggttaaagggcgtaaaggccactaccgggagttgtttgaacaaatc
cgtaagcaaggttatgtgaaggtacgtgtggatggagaaatattggaccttgttccaaaa
atgcaggtcgaccgctacaaaatacacgatattgaaatcgtcgtagatcgtctgaaagta
gagcgtgaagataaaaagcgcttacaaacttccgtgatgcaggcgatgaaaacagcgaaa
ggtatcatcaaggtctccacgaaagataatcaggagcaattctatagccgttatctcatg
gatgccgaatcggggatctcttatgatgagccacagccaaataccttctcattcaattcc
ccatacggtgcgtgtccgacatgtgatggtttgggctatatttttgaaattgataagaat
gccgttatcccggataaaaaactaagtattcaaaaaggtggtttggcccctttgggacct
acccgggaaaattggacttcggaagtcttgaaagctgtcgcaaaaaaattagattttacc
attacaacaccgcttgaaaaactaactgaagaacagattgaccagcttttatttggcaat
aaggaagagcctatcgttgtcacggtatcttatggaagttatggcacacgtgaatatcgt
gttgaatttgaaggaatctttaagatgctggaagagttttcgggaaaatcatcggatgag
gcaccttctttagatgacttcagaacgaaagtgacctgtccaacctgtgcgggagctcgt
ctgaaaaaagaatcgttacattttaaaattgcggataaaaacatccatgagctctcaacg
atggacattacatccatcaaagaatggtttgatcaggtagaaagcaaacttgatgaacgc
cagctcattattgcaacggagatattaaaggaaatccgcgcacgtttaggcttcctgctg
gatgtcggcctaaattacttgaccttggaccgtacagctaaaacactttcgggtggtgaa
gcacagcggatccgtttggccacacagattggttcccaactggtgaatgtactttatatt
ctggatgaaccgagtattgggctccatcagcgggataacgaacgtttgatcaatgcgctt
aaaaacctacgcgatattggcaattcggtccttgttgtggaacatgacaaagacatgatc
ctacatgccgaccatgttatcgacatgggacctgctgcaggcgttcatggtgggactgtg
gttgccgaaggtacaccaacagaaatcctaaaatcgaactctttaacagcagcttacctc
aacgggacaaaagaggttaagattcccgagaaacgccgtgagggcaatggaaaaacattg
tcattacatggagcaaccggacataacttaaaaaatctgtctgtctcttttccattagga
aaactcattgttgtatcgggtgtttcaggttcgggtaaatcaagcctaatcacaggtact
ttatacccgattttgaataaacattttttcagagccaaagcaattccacttcctttcaaa
aaaattgaagggttagaacatattgacaaagtcatcgagatcgaccaaagtcctatcggc
cgtacaccacggtccaacccttcgacctataccggtgtattttcggatatcagaactttg
tttgttcaacttccagaagctaagatcagaggctataaaccaggaagattttcctttaac
gtcaaaggtggtcgttgtgaaacctgtcagggagccgggctgaaagtcatcgaaatgaat
ttccttcccgatgtacaggttccttgtgaaacatgtcacggaaaacgctacaaccgagaa
actttagaggtacgctacaaaggaaaatccatttccgatgtacttgatatgagcatcaac
gatgctgtggatttcttcgaaaatgtaccgagtatttaccgaaagatcaaaacactgcag
gatgtaggtttgggttatatcaccttaggacagtcctccacaaccttatcggggggtgag
gcacaacgggtaaaattggctactgaactttctaaaaaagacactggaaatacattctat
atccttgatgaaccgacaacaggtcttcactttgaagatgtcaatgtccttatgggcgtt
atcaatcgtctggtcgagcgcgggaataccattttgattattgagcataaccttgatgtc
gttaaatcggccgattgggtcattgatatcggtcccgagggtggcaaagacggcgggcag
gttctatttgaaggaacacctgaaaacttaattaaaaataataaaagcgaaacagcacgt
ttcttaaaattggaaatgtaa
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