Sphingobacterium multivorum: I6J00_15940
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Entry
I6J00_15940 CDS
T07579
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smui
Sphingobacterium multivorum
Pathway
smui03030
DNA replication
smui03410
Base excision repair
smui03420
Nucleotide excision repair
smui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J00_15940 (polA)
03410 Base excision repair
I6J00_15940 (polA)
03420 Nucleotide excision repair
I6J00_15940 (polA)
03440 Homologous recombination
I6J00_15940 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smui03032
]
I6J00_15940 (polA)
03400 DNA repair and recombination proteins [BR:
smui03400
]
I6J00_15940 (polA)
Enzymes [BR:
smui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J00_15940 (polA)
DNA replication proteins [BR:
smui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I6J00_15940 (polA)
DNA repair and recombination proteins [BR:
smui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I6J00_15940 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J00_15940 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
DUF3913
Motif
Other DBs
NCBI-ProteinID:
QQT43243
LinkDB
All DBs
Position
3684326..3687148
Genome browser
AA seq
940 aa
AA seq
DB search
MSNLNQYNKKLFLLDGMALIYRAYFALSKTPRITSTGLNTGAIMGFTNTLLDVLKNQQPS
HIAVVFDTAAPTARHIEFEAYKAHRESMPEDLAASIPYINRLIEGFNIPIITMDGYEADD
IIGTLAKKAEKQNFQVYCMTPDKDFGQLVSENIFIYKPARMGNGAEVQGVKEILEKWEIS
DVCQVIDILGLWGDAVDNIPGIPGIGEKTAKKLVQEYGSVEGIIANADQLKGKMRENVEN
FAEQGLISKKLATILLDVPIELDEKSLELEDPNKEILEPLFAELEFRTLGKRVFGDEFSV
LDKSIPTNGQMDLFSTTTTTITTTEIVTEISVENVAINNIHNTTHEYVLADTAEKQVALA
EQLASLDSFCFDTETTGLDANLADIVGLSFSFENAKAYYVPTPADREGAQAIVDIFKPVL
ENPNIEKIGQNIKYDILLLARYGVKVQGSLFDTMLAHYLIDPDTRHGMDVLAENYLNYSP
VSITELIGEKGKKQGNMRDVEVEKVKEYAAEDADITLQLKNVFQPLLVETNTMQLAQDVE
FPLVYILAEIERNGVKIDVPALEEFSKTLDQDIKNLEESIFEKAGVNFNIASPKQLGEVL
FDKLQLDPKAKKTKTGQYKTGEDVLLALAHKSDIVQDILNFRQMQKLKSTYVDALPELIN
PETGLIHTSYNQAVAATGRLSSTNPNLQNIPIRTERGREVRKAFIPRSENNVILSADYSQ
IELRLIAELSKDQNMMEAFSQGHDIHRATAAKVYNVDFDAVTSEQRRNAKAVNFGIIYGQ
SAFGLSQNLGISRKEASDIINEYFNQYTGIKKYMSDAVESAKEKGYVETILKRRRYLRDI
NSANMTVRGFAERNAINAPIQGSAADLIKLAMIAIQKEIEQRGLTGKMIMQVHDELVFDV
PKDEIEVFKKIILDKMSNAIKTSVPLIVEIGKGKNWLEAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatttaaatcaatataataaaaaactatttcttctagatggaatggctctgata
tatagagcttattttgcattgagcaaaactccccgaattacctcaacagggttaaataca
ggagcaatcatgggatttaccaataccctattggatgtattgaaaaatcagcaaccttcc
cacatagcagtagtgttcgacacggcggcacctaccgcacgacatattgaatttgaagct
tataaagcacatcgcgaatctatgccagaagaccttgcggcctctatcccctatatcaat
cgcttaattgagggcttcaatattccgatcatcaccatggatggttacgaggccgacgat
attatcggtacgctggcaaaaaaggctgaaaagcaaaattttcaggtctattgcatgaca
ccggataaagatttcgggcaacttgtgtctgaaaatatctttatctataaacctgcacgc
atgggtaatggagcagaagtacaaggtgtcaaagagattcttgaaaaatgggaaatttct
gacgtttgccaggtcatcgatatccttggtctttggggcgatgccgtcgacaatatccct
ggtatacctggaattggagaaaaaacagcgaaaaaacttgttcaggaatacggatctgtc
gaaggcattatcgctaacgcggatcagcttaaaggaaaaatgcgcgagaacgtggagaat
tttgcagaacaagggcttatctccaaaaaattagccactattttattggatgtacccatt
gaacttgatgaaaaatcgctagaactggaagacccaaacaaagaaatccttgaaccacta
tttgcagaattggaattccgaacacttggaaaacgagttttcggcgatgaattctccgta
cttgacaagagcattcctacaaatgggcaaatggatttattttcgacaacaacgacgaca
attaccacgaccgaaattgtcactgaaatcagtgtcgaaaatgtcgcaataaataatata
cataatacaacacatgagtatgttttggccgacacagcggaaaaacaagtagcgctagcc
gaacagcttgcgtctttagatagtttttgtttcgacacagaaacaacaggattggatgca
aaccttgccgatattgtgggcttatcattttcttttgaaaacgctaaagcgtattatgtc
ccaacacctgccgatcgtgagggtgctcaagctatagtcgatattttcaagccagttcta
gaaaacccaaacatcgagaaaataggacaaaacatcaaatacgatattttgttattagca
cgctatggtgtaaaggtacaaggttccctttttgacaccatgcttgcacattatctaatt
gatccagatacccgccacgggatggatgtacttgcagaaaattacctgaattacagcccg
gtatcaatcaccgaacttatcggtgaaaagggaaagaagcaagggaatatgcgcgacgtt
gaagtcgaaaaagtaaaagaatatgctgctgaagatgcagacattaccctacagctaaaa
aatgtgtttcaaccccttcttgtcgagaccaacaccatgcagctcgctcaggatgtcgaa
ttcccattagtctatatactcgctgaaattgaacgaaacggtgtaaaaatagatgttccg
gcacttgaagagttttcaaaaacactggatcaggacattaaaaatctcgaggaatccatc
tttgagaaagcgggcgtaaatttcaatatcgcctcccctaagcaattgggagaagtctta
ttcgataaactgcaactggatcctaaagctaaaaaaacaaaaacaggacaatataaaaca
ggtgaagatgtattattggcattggcccataaatcagatatcgtccaagatatcttgaac
tttaggcagatgcaaaaactcaaatctacctatgttgatgcgctacctgaattgataaac
cccgaaacagggctcattcatacgtcatataatcaagcggttgccgcaacaggccgtctg
agctcaactaatccgaacttgcaaaatatcccgatccgtaccgaacggggaagagaagtc
agaaaagcctttatcccaagatctgaaaacaacgtgatcctctcagccgattattcacag
attgaactccgcctgattgccgaactcagtaaagatcagaatatgatggaagcatttagt
caaggtcacgatatccaccgggcaacagccgcgaaagtctataatgtggattttgatgcc
gttacttctgaacaacgtcgcaacgcgaaagcagttaactttggcattatctatggccag
tcggccttcggcctttcccaaaaccttggcatatctcgtaaagaagcatccgatatcatc
aatgaatattttaaccaatatacaggaataaaaaaatacatgagtgatgccgtcgagtct
gcaaaagagaagggttacgttgaaacaattttaaaacgaagacgttatttgagagatatc
aattctgcaaacatgaccgttcgcggattcgctgaaagaaacgcaattaatgctccgatc
caaggatcggcagcagatttgatcaaacttgccatgatcgcgattcagaaggaaattgaa
cagcgaggtttaacaggtaaaatgatcatgcaggtgcatgatgaattggtttttgacgta
cctaaagacgagatcgaggtattcaaaaaaattattttggacaaaatgtccaatgctata
aaaacaagtgttcctttgatcgtagaaattggaaaaggcaaaaattggctagaagcacac
taa
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