Sulfurospirillum multivorans: SMUL_2251
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Entry
SMUL_2251 CDS
T03049
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
smul
Sulfurospirillum multivorans
Pathway
smul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMUL_2251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smul03400
]
SMUL_2251
Enzymes [BR:
smul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMUL_2251
DNA repair and recombination proteins [BR:
smul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
SMUL_2251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
Helicase_C
UvrB_inter
CarD_TRCF_RID
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AHJ13504
UniProt:
A0AA86ANF2
LinkDB
All DBs
Position
complement(2162716..2165685)
Genome browser
AA seq
989 aa
AA seq
DB search
MLQAACYEFFQTKNDLQLLGVKGEKEAFLASEVALFLGKKSYLLPDLRANMGDDLLSFHE
EMVELLRSLHAYYKDPSSKKILIAPIRTLLTPLPKAELFSTFSLEFGMRLHLERFREQMF
YWGYLAVDVVQGKGEISIRGDIIDVFPPDSEKALRLSLFDDEVESIRFFDCESQKSEKEE
LESYTLFPALFALDEERHTQMQKRIDSLKSDSFTKDIHSLGLWVLGESGAVYTESFKTYL
SADALEELGEIALFDEEGAQKLHNLPCIPEAKQYREIAPSNIKTFLELHQAKKITILARN
EVLLRMVDVDSLHVKWIQSERIVNIMNAEEIILSLNKPTTKIKRKRANIVLDELKNGDYV
VHENYGIGIFKGLTQAIVLGATKDFVLIEYLGDDKLLLPVENLHVIDRYIGESGGLVSVD
RLGKGSFQKLKAKTKERLLEIASEIIAIAAKREMVDGLSLAMEEGEMVQFEADAGFAYTE
DQKRVIGEILSDFKSGKMMDRLLSGDVGFGKTEVAMNAIFATIRNGFQALLIAPTTLLCS
QHFKSLSSRFAKYNIKVAQLDRFTTAAQKQVILKELKSGALQVCVGTHSLFEVELFNPAL
VVVDEEHKFGVKQKEKLKNFRENVHILSMSATPIPRSLNMALSSIKQYSQLLTPPNDRED
VRTFVKEYDAKVIKEAIIREMRRGGQVFFVHNRIATIEAKRKELLSMMPNLRILTLHSEI
SATVTEKEMLHFEEKAYDVLLSTSIIESGIHIPNVNTILIDSADHFGMADLHQLRGRVGR
SRRQGFCYFLVKDKEELSESAKRRLIALESNSYLGSGSILAYHDLEIRGGGNLVGEAQSG
HLKNIGYSLYLRMLEDAINSLMGKTPIASREVDIKLSISAFISDSYIPEDRVRLELYRRL
SKCGSIHDVLEIEEEMVDRFGKLDVPTKQFLELIEIKILATGQNVVLVSNYAQNITIKYE
DEKKITLQSRSRDDDDVIATVLVQLRGKA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
ttgttacaagctgcgtgttatgaattttttcagaccaaaaatgacctccaacttttaggt
gttaaaggcgaaaaagaggctttcttagcctctgaagtcgctctgtttttaggtaaaaaa
agctatctcttacccgatcttagagccaacatgggcgatgatctgctctcctttcatgaa
gagatggtggagcttttacgctcattgcatgcgtactacaaagatccttccagcaaaaag
atcttaattgccccgattcgaaccctcttaacacccctgcccaaagctgaactttttagt
acgttttcattagaatttgggatgcgtctgcatctggagcgctttcgtgagcagatgttt
tactggggttatcttgcagtcgatgtggtgcaaggcaaaggtgaaatctccattcggggt
gacatcattgatgtttttcctcccgatagtgaaaaagcattacgtctcagcctttttgat
gatgaagtagagagcattcgtttttttgactgtgaaagccaaaaaagtgagaaagaagag
ttggagagctataccctttttcctgccctttttgcccttgatgaagagcgtcatacacag
atgcaaaagcgtattgattcgcttaaaagtgatagctttaccaaagacattcactccctt
ggactctgggttttgggcgagagtggtgcggtttatacggagagttttaaaacctatttg
agtgcagatgcgctcgaagagctgggtgaaattgccctgtttgatgaagaaggggcccaa
aaacttcacaatcttccttgcatccctgaagcaaaacagtaccgcgaaattgcgcctagc
aatatcaaaacatttttagaactccatcaagccaaaaagattacgattttagctcgaaac
gaagtgttgcttcgcatggtggatgtggattctttacatgtaaagtggattcaaagtgag
cgcattgtaaacattatgaacgctgaagagatcattctctctctcaataagcctacgacg
aaaatcaaacgcaaacgtgccaatatcgtccttgatgagctgaaaaatggcgactatgtg
gtgcatgaaaactacggtatcggtatttttaaagggttaacccaagcgatcgtgcttggt
gcgaccaaagattttgttttgatcgaatatttgggcgatgacaagcttttattgcccgtt
gagaatttacatgtaatcgatcgttacatcggtgaaagcggcggtttggtcagtgtcgat
cgtcttggaaaagggagtttccaaaaactcaaagccaaaaccaaagagcgactgttggaa
attgccagcgaaattatcgccattgccgccaagcgtgagatggtggatggacttagtctt
gcaatggaagagggcgagatggttcagtttgaagccgacgctggttttgcgtataccgaa
gatcaaaaacgggtcattggcgaaattctgagcgattttaaaagcggtaaaatgatggac
aggcttttaagtggtgatgtcggttttggtaaaacagaagtcgcgatgaatgccattttt
gcgaccattcgcaatggttttcaagccctgttaattgcccctaccacgcttttatgttcg
caacactttaaaagcctctcctcgcgttttgccaagtacaacatcaaagtagcacaactc
gatcgttttacgaccgcggcacaaaagcaggtcattttaaaagagcttaaaagtggcgct
ttgcaggtgtgtgtgggaacgcattccctttttgaagtcgaactgttcaatccagcgctt
gtcgtggttgatgaagagcataaatttggcgtaaagcaaaaagagaagcttaaaaatttc
cgtgaaaacgttcatattctctccatgagtgccacgccaatccctcgaagtcttaatatg
gcgctgagttccatcaagcagtactcccaactgctcacacctcccaacgacagagaagat
gtgcgaacctttgtcaaagagtacgatgccaaggtgattaaagaggcgattatccgtgag
atgagacgcggcggtcaagtcttttttgttcacaatcgcatcgcgaccatcgaagctaaa
cgcaaagagttgctctccatgatgcccaatcttcgcatcttaacgcttcactcagaaatt
agcgcgacggtgaccgaaaaagagatgttgcactttgaagagaaggcgtacgatgtgctt
ttgagcacgtccatcatcgaatcaggcattcacattcccaatgtgaatacgattctgatc
gattcggctgatcattttggtatggcagatcttcaccaacttcgcggtcgtgtgggacgt
tctcgccgtcaaggtttttgctactttttggtgaaagataaagaagagctctctgagtca
gctaaaagacgtctgatcgcactcgaatctaattcgtatctgggcagtggctccatccta
gcataccacgaccttgagatcagaggtggcggtaacttggtcggtgaggctcaaagtggg
catcttaaaaacattgggtattcactctatttgcgaatgctcgaagatgcgattaactct
ttgatgggaaaaacaccgattgcttcacgtgaagtggacatcaagctctcgatcagcgcg
tttatcagcgacagttacattcccgaagatcgcgtacgcttggagctttacagacgtctg
agcaagtgtggaagcattcatgatgtcttagagatcgaagaagagatggtggatcgtttt
ggcaagcttgatgttccaacaaaacagtttttagagctgatcgagatcaagattttagcc
acagggcagaacgttgtactcgtttccaattatgcgcaaaacattacgatcaaatacgaa
gatgagaaaaagataacattgcaatcacgcagtcgtgacgatgatgatgtcatcgcaacc
gtgctcgtacagctaaggggcaaagcatga
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