Sulfurospirillum multivorans: SMUL_2938
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Entry
SMUL_2938 CDS
T03049
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
smul
Sulfurospirillum multivorans
Pathway
smul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMUL_2938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smul03019
]
SMUL_2938
03009 Ribosome biogenesis [BR:
smul03009
]
SMUL_2938
Enzymes [BR:
smul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SMUL_2938
Messenger RNA biogenesis [BR:
smul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SMUL_2938
Ribosome biogenesis [BR:
smul03009
]
Prokaryotic type
rRNA helicases
SMUL_2938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHJ14174
UniProt:
A0AA86APR5
LinkDB
All DBs
Position
2821413..2823248
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AA seq
611 aa
AA seq
DB search
MENNTPATPSTVTFESFGLHADILKAVVDAGFTEPSPVQAESIPLVLAGNDIVAQAQTGT
GKTAAFGLSTMSMLDPHLNKVQLLVITPTRELATQVSDELYSLGRFRGVKTVTIYGGSSY
SRQIGLIEKGASVIVATPGRMLDLLKNGRLPGFSPKMVVLDEADEMLDMGFLEDIEEIFT
YLPKERQTLLFSATMPDPIKRLASKILNDPKFVSVTPKDHTTNEDIEQLYYVINEYERDD
AMIRLLDALEPEKSIVFCRTKKEVDRLSTQLMAVGHAAKGLHGDMEQNQRESVIKAFRSS
QIEILVATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVTPIEF
HSMQRIGKKVGSKIEHRIVPSLRDVKENKLIKIAEDIKNAELNENAVKLLAILEEEMDMS
QIALKLLSNLLKENTPIGPDKIGLDKKTLESVVKNIEERDGGRGGRSGGYRGNSGGGYRG
NSGGSRDGGGYRGNSGGSREGGGYRGTSSTGSRDGGGYKGSNPRSDSGSRDAARPPRGDG
VPRSDSRGESRNPFAKEGSSSAPREGGGYKGTRDSSDSRPPRAPRADRPAAPRSDAGRAP
KAAPRNAYKKD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaacacacccgcaacaccctctaccgtcacatttgagtcatttggcttacac
gcagacatccttaaagccgtcgtagatgctggctttacagagccaagtcccgtccaagca
gaatcaatcccgttagtcttagcaggtaacgacatcgttgcacaagcacaaacaggtaca
ggtaaaacagctgcatttggtctttctactatgagtatgcttgacccacatcttaataaa
gttcaacttttagtcatcacaccaacacgtgagcttgcaacacaagtcagcgatgagctt
tactcactcggacgttttcgtggtgttaaaaccgtaacgatttacggtggtagctcttac
tcacgtcaaattggtttgatcgaaaaaggtgcaagcgttatcgtagcaactccaggtcgt
atgttagaccttctcaaaaacggtagactcccaggcttttcacctaaaatggttgttttg
gatgaagcggatgagatgcttgatatgggcttcttagaggacatcgaagagatctttacc
taccttccaaaagagcgtcaaacactacttttttctgcaacaatgcctgatcctatcaaa
cgtcttgcgagcaaaattttaaatgacccaaaatttgtcagtgtcacaccaaaagatcac
acaaccaacgaagatatcgaacaactttactacgtcattaacgagtacgagagagacgat
gcgatgattcgtcttttagatgctcttgagcctgagaaatccatcgtcttctgccgtact
aaaaaagaggttgatagactttctactcaattgatggcagtcggacacgcggcaaaaggt
ttgcatggcgatatggagcaaaatcaacgtgagagcgttattaaagcattccgtagttca
caaatcgaaatccttgtagcaaccgatgttgcggcgcgtggtcttaacgttgctgacatc
agccacgtatttaactaccatatgccatttgatccagagagttatgttcaccgtatcggt
agaaccggacgtgcaggtaaaaaaggtacagcgattacattggtaacgcctattgagttt
cactcaatgcagagaattggtaaaaaagtaggctctaaaatcgagcacagaattgttcca
agtttacgagacgtcaaagagaacaaactgatcaaaattgcagaagatattaaaaatgca
gaactcaatgaaaatgctgtcaaacttcttgctattttggaagaagagatggatatgtcg
caaatcgcgcttaaacttctctcaaaccttctcaaagagaacacaccaataggtccagat
aaaatcggtctagataaaaagaccttagagtctgtggttaaaaacatcgaagagcgtgat
ggtggtcgtggcggcagaagtggcggttacagaggaaactctggcggtggctacagaggc
aattcaggcggatcacgtgatggtggcggctatagaggaaactctggcggatcacgcgaa
ggtggcggttacagaggcacatcatccacaggttcacgtgatggtggtggatacaaaggt
tcaaacccacgtagtgatagcggaagcagagatgcagctcgtcctccaagaggcgatggc
gttcctagaagtgatagcagaggcgagagccgtaacccatttgcaaaagagggaagcagt
tcagctccacgcgaaggcggcggatacaaaggcacacgtgatagcagcgatagcagacca
ccacgcgcgccaagagccgatagaccagccgcaccacgcagtgacgcaggtcgcgctcca
aaagccgctcctcgtaacgcttacaaaaaagactaa
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