Candidatus Karelsulcia muelleri ML: SMML_v1c01430
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Entry
SMML_v1c01430 CDS
T03536
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smum
Candidatus Karelsulcia muelleri ML
Pathway
smum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMML_v1c01430 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smum03019
]
SMML_v1c01430 (pnp)
03016 Transfer RNA biogenesis [BR:
smum03016
]
SMML_v1c01430 (pnp)
Enzymes [BR:
smum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SMML_v1c01430 (pnp)
Messenger RNA biogenesis [BR:
smum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SMML_v1c01430 (pnp)
Transfer RNA biogenesis [BR:
smum03016
]
Prokaryotic type
tRNA degradation factors
SMML_v1c01430 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
AIZ48913
LinkDB
All DBs
Position
complement(157139..159280)
Genome browser
AA seq
713 aa
AA seq
DB search
MKLMIPELIKENIFLEDGRALSIETGKFARKANGSAVVRMGNTSLLATVVIYKEYKEDFK
FRPLTIDYREKYSAGGKIPGGYIKREGRPSEEEILIMRLVDRLLRPLFKDNYYQEIQIMI
SLLSYDINVLPDGLAGLVASTAVSISEIYFKGPVSTVRIIRINDAFIINPGIEELKKSEL
DLIVGGTNNYILLVEGEMREISEIEMMEAIVKAHKYIKFQIEAQISLITKNKKFLNKRLY
NIKLYNYYYKYLNFNLKVFYIKEKINFLYYEEIYYIYKGCFFKRSKQIEKILNEMKFHFS
NESIINIEIDIIFDEIKKEIIKNILLKENIRLDGRSLDDLRTICSKVDCLPGVHGSAIFT
RGETQALSTVTLGSSLDVNKIDNAIIRAKQRFYLHYNFPPFSTGEIKFLKGVSRREIGHG
NLAQRALKNIIPFVTPYTIRVVSDVLESNGSSSMATVCASTLALMDAGITVKRPVSGISM
GLIMNYLTGEAIILSDILGDEDYIGDMDFKITGTEYGITACQIDLKIYGITYEVLSNTIF
KAKKGLLFIIKKMLTTLSFPRKSLKFPAPKIYTFYIPKKMIGTVIGSGGKIIQEIQVSTE
TNIKIKEKGSLGIIEILGKNETKLKSAILKIKNITFVPKVGKIYKAQVKNIKQFCVLVEI
SKSVEGLLHISEILTKVKNFLRTGDIIYVKYLGQNNKLGKIKLSHKILFYRNI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatgatcccagaattaataaaagaaaatatttttttagaagatggacgtgct
ttaagcatagaaactggaaaatttgcgcgtaaagctaatggatcagctgtagttcgtatg
ggaaatactagcttattagccactgtagtaatttacaaagaatacaaagaggatttcaaa
tttagacctcttactatcgattatagggaaaaatattcagctggcggaaaaattccaggt
ggatatataaaacgtgaaggtaggccatctgaggaagaaatattaattatgagattagta
gatcgtttattacgtccactttttaaagacaattattatcaggaaatacaaataatgata
tctttgttatcatatgatataaatgtattgcctgatggattagctggattagtagcttct
acggcggtttctatctcagaaatttattttaaggggccagtatcaacagttcgtataata
cgaattaatgatgcatttattattaatcctgggattgaagaattgaaaaaatcagagtta
gatttaatagtaggaggaactaataattatattcttcttgtagaaggagaaatgagagag
atctctgaaatagagatgatggaagcaatagttaaagcacataagtatattaaattccaa
attgaagctcaaattagtttaattactaaaaataaaaaatttcttaataagagattatac
aatattaaattgtataattattattataaatatttaaattttaatttaaaagttttttat
ataaaagaaaaaataaattttttatattatgaagagatttattatatctataaaggttgt
ttctttaaacgttctaaacaaattgagaagattttaaatgaaatgaaatttcatttctct
aatgagagcattataaatattgaaattgatattatatttgatgaaatcaaaaaagaaata
attaaaaatattcttttaaaagaaaatattcgtttagatggtagatcattagatgatctt
agaacgatttgtagtaaagtcgattgtttgcctggtgtacatggatctgcaatttttaca
agaggagaaacacaagcattatctacagttactttaggttcatcattagatgttaataaa
attgataatgctattatacgagccaaacaaagattttacttacattataatttccctcct
ttttcaactggagaaattaaattcttaaaaggagtctcaagacgtgaaattggacatgga
aatttagctcaacgtgctttgaaaaatataataccttttgtaactccttatactataaga
gtagtatcagatgttttagaatctaatggatcttcttctatggctactgtatgtgctagt
acattagcattaatggatgcaggtattactgtgaaaagaccagtttcaggaatatctatg
gggttaattatgaattatttaacaggtgaagccataattctttcagatatattaggagat
gaagactatataggggatatggactttaaaattacaggtactgaatatggtattacagca
tgtcaaattgatcttaaaatttatggaattacttatgaggtattatcaaatacaattttt
aaagccaaaaaagggttattatttataataaaaaagatgcttacaactttaagttttcct
agaaaatcacttaagtttccagctcctaaaatttatactttttatataccaaaaaaaatg
ataggaactgtaataggttctgggggaaaaataatacaagaaatacaagtttctacagaa
actaatattaaaatcaaagaaaaagggagtttaggtataattgaaattttaggaaaaaat
gaaacaaaattaaaatcagcaattttaaaaataaaaaacattacttttgttcctaaagta
ggaaaaatttataaagctcaagtgaaaaatataaaacaattttgtgttttggttgaaata
tctaaatctgtagaaggattattacatatatcagaaatattaactaaagtcaaaaatttt
ctaagaacaggagatataatctacgtaaaatatttgggtcaaaataataaattaggaaaa
attaaattatcccataaaattctgttttatcgtaatatttaa
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