Candidatus Karelsulcia muelleri PSPU: SMPSPU_126
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Entry
SMPSPU_126 CDS
T03672
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smup
Candidatus Karelsulcia muelleri PSPU
Pathway
smup03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMPSPU_126 (uvrD)
03430 Mismatch repair
SMPSPU_126 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smup03400
]
SMPSPU_126 (uvrD)
Enzymes [BR:
smup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMPSPU_126 (uvrD)
DNA repair and recombination proteins [BR:
smup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMPSPU_126 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SMPSPU_126 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
AAA_30
DUF7653
Motif
Other DBs
NCBI-ProteinID:
BAO66289
UniProt:
A0AAD1AZ12
LinkDB
All DBs
Position
131135..133246
Genome browser
AA seq
703 aa
AA seq
DB search
MKYLSILNKTQYKAVTTIDRPTMVIAGAGSGKTRVLIYRLIHLIKSGVKSRNILALTFTK
KSANEMKYRLSSLIDKNELDQIYIGTFHSIFAKLLRKNSDLIGYKKNYIIYDRYDSEKII
KKIIKNLNLDKKIYRSKYLLDKISMIKNHYFNERNLYITNIYANYKKYCYQNGIMDFDDI
LLYTNILFNKNPEILKKYQEYFKYILIDEYQDTNYSQYRIIKLLSLKHNNIFVVGDDSQS
IYSFRGANINNILNFKKDYKNAVIIRLEQNYRSTKYIVDVSNQIISLNKRKIDKKLWTNN
KIGKKIKLYKAFSSFEESDFVANTIDQLKKKKKLKYSDFGVLYRTNAQSRSLEESFIKKK
IPYNIYGSISFYKRKEIKDLIAYFRLIVNINDEESLIRIINYPKRGIGEVTLKKIFFLSK
QNDKRIFEILKNINNYKSIINRDQKILDNISNFCNKILFFNKRLDEDAFILSKEISESFG
LLEEIKKDKIKQGIDNVEEFLNSISTFVEDKKKIKNEEISLNAYLESLYLDLDLDYKFNN
LTKESVSLMTIHLSKGLEFPIIFIIGLEEKIFPSILSISSQLEIEEERRLFYVALTRAKE
DIFLTFSKNRYKWGKIVPTICSRFVKEIDKKYIKYIKNDLNHKKFDDTSLLGSYTNNLKE
GMIVYSNSFGRGKIIKIEGQIITVYFNNIGEKKILNTKLKIIY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttaagtattcttaataaaactcaatataaagctgtaactactatagataga
cctactatggtaatagcaggagctggatcagggaaaactcgtgtacttatatatcgttta
attcatttaattaaatctggtgttaaaagtcgaaatattttagcattaacttttactaaa
aaatctgcaaatgaaatgaaatataggctttcctctttaattgataaaaatgaattagac
cagatttatataggtacgtttcattcaatttttgccaaacttcttagaaagaatagtgat
ttaattggatataaaaagaattatattatatatgatagatatgattctgaaaagattata
aaaaaaataataaaaaatcttaatttagataaaaaaatttatagatccaaatatttattg
gataaaatatctatgattaaaaatcattattttaatgaaagaaatttatatataactaat
atatatgctaattataaaaaatattgttatcaaaatggaataatggattttgatgatata
ttattatatactaatatattatttaataaaaatcctgagattcttaagaaatatcaagaa
tattttaaatatatattaattgatgaatatcaagatacaaattattctcaatatagaata
ataaaattattatcattaaaacataataatatttttgttgttggagatgattctcaaagt
atatattcatttcgtggagcgaatattaataatattttaaattttaaaaaagattataaa
aatgcggttattattaggttagaacaaaattataggtctacgaaatatattgtagatgta
tctaatcagattatttctttaaataaaagaaaaattgataaaaaattatggacaaataat
aaaattggaaaaaaaattaaactatataaagccttttcttcttttgaagaaagtgatttt
gtagccaatacaatagatcaattaaaaaaaaaaaaaaaattaaaatatagtgattttggt
gttttatatcgtacaaatgcacaatctagatctttagaagagagttttattaaaaaaaaa
ataccatataatatttatggaagtatttcattttataaacgaaaagaaattaaagattta
atagcatactttcgtttaatagttaatattaatgatgaagaatctttaattaggattatt
aattatcctaaaagaggaattggagaggtaactttaaaaaaaatattttttttatcaaaa
caaaatgataaaagaatatttgaaatattaaaaaatattaataattataagtctattatt
aatagagaccaaaaaatattagataatatctctaatttttgtaataaaatattatttttt
aataaaagattagatgaagatgcatttattctttctaaagaaatatctgaatcctttgga
ttgttagaagaaataaaaaaagataaaattaaacaaggaatagataatgttgaagaattt
ttgaatagtatttctacttttgtagaagataaaaaaaaaataaaaaatgaagaaatttct
ctaaatgcatatttagaaagtctctatttagatttagatttagattataaatttaataat
ttaactaaagaaagtgtttctctgatgactattcatctatctaaaggattagaatttcca
ataatatttattataggtctagaagagaagatatttccatctatattaagtatttcatct
caattggaaattgaagaagaaagacgtttattttatgtagcattaacacgtgctaaagaa
gatatttttttaactttttctaaaaatagatataaatggggtaaaatagtacctactata
tgtagtaggtttgttaaagaaatagataaaaaatatataaaatatataaaaaatgattta
aatcataaaaaatttgatgatacctcattattaggatcatatacaaataatttaaaagaa
ggtatgattgtatatagtaattcctttggaagaggaaaaataattaaaatagaaggtcaa
attattactgtatattttaataatataggtgaaaaaaaaatattaaatactaaattaaaa
attatatattaa
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