Candidatus Karelsulcia muelleri PSPU: SMPSPU_233
Help
Entry
SMPSPU_233 CDS
T03672
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smup
Candidatus Karelsulcia muelleri PSPU
Pathway
smup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMPSPU_233 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smup03019
]
SMPSPU_233 (pnp)
03016 Transfer RNA biogenesis [BR:
smup03016
]
SMPSPU_233 (pnp)
Enzymes [BR:
smup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SMPSPU_233 (pnp)
Messenger RNA biogenesis [BR:
smup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SMPSPU_233 (pnp)
Transfer RNA biogenesis [BR:
smup03016
]
Prokaryotic type
tRNA degradation factors
SMPSPU_233 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
RNase_PH_C
PNPase
KH_PNO1_2nd
KH-I_KHDC4-BBP
S1_2
Baculo_gp64
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
BAO66379
UniProt:
A0AAD1AZC1
LinkDB
All DBs
Position
complement(242548..244671)
Genome browser
AA seq
707 aa
AA seq
DB search
MTPELIKENLLLEDGRTISIETGSLACQANGSAVVRMANTSLIATVVVSTEDKKGVNFLP
LNIDYREKYSAGGKIPGGFIKREGRPSDEEILTMRLVDRLLRPLFPKIFYKEIQIMISLL
SYDINVLPDGLAGLVASTAVYLSGIPFKGPVSAVRIIRIKNLFIINPGIEDVKKSDIDLI
VGGTINSILMVEGEMKEVSEKEIIKIIKIAHFYIKRQIKAQINLLKKIKNKSLSKINFNI
KNNNFFYLKEKLNFLFFYKIYNIYKKFYKKKIRLKKINRLLNNIKKLFFNDNILINENEI
DIIFFEIKKKIIREIICKENLRLDGRSLDDIRNISSQVDCLPGVHGSAIFSRGETQALST
VTLGSSLDVNKIDNVIIQDKQKFYLHYNFPPFSTGEIKLLKGVSRREIGHGNLAQRALKN
IIPFDNPYTIRVVSDVLESNGSSSMATVCASTLALMDAGIPIKRPVSGISMGLIFNKFTG
EALILSDLLGDEDNIGDMDFKITGTKYGMTACQMDIKISGISYDILLKTILKAKKIIIFI
INNMLTTLNAPRISLKPTAPKIYTFNIPKTFIGAVIGPGGKIIQEIQSSTETSIKIEEKE
NLGKIEILGKNYNKIKDAIEKIQSIVFLPKIGKIYKAKVKYIKPFGVFVELSKGIEGLLH
ISEISWKKLTNLENYIKIGHFINVKYLGKNNKNGKIKLSHKILLSRK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacaccagaattaataaaagaaaatcttcttttagaagatggacgtactataagtata
gaaactggatctttagcttgtcaagctaatggatctgctgtcgttcggatggcaaatact
agtttaatagctactgtagtagtatcaacagaagataaaaaaggtgttaattttttacct
ttaaatatagattatagagaaaaatattcagctggaggaaaaattccaggtggatttata
aaacgtgaaggtagaccttctgatgaagaaatattaacaatgagattagtagatcgttta
ttacgtccactttttccaaaaatattctataaggaaatacaaataatgatctctttgtta
tcatatgatataaatgtattacctgatggattagctggattagtagcttctactgctgta
tatctatcaggaattccttttaaaggtcctgtatcagcagttcgtataatacgaattaaa
aatttatttattattaatcctggtattgaagatgtaaaaaaatcagatatagatttaata
gtaggaggtactattaattctattttaatggtagaaggagagatgaaagaagtttctgaa
aaagaaataattaaaattattaaaattgcacatttttatattaaaagacaaattaaagct
caaattaatttattaaaaaaaataaaaaataaatctctctctaaaataaattttaatatt
aaaaataataattttttttatttaaaagaaaaattaaattttttatttttttataaaata
tataatatttataaaaaattttataaaaaaaaaattcgtttaaaaaaaattaatagatta
ttaaataatataaaaaaattattttttaatgataatattttaattaatgaaaatgaaata
gatattattttttttgaaattaaaaaaaaaataataagagaaattatttgtaaagaaaat
cttcgtttagatggtagatcattagatgatattagaaatatttctagtcaagtagattgt
ttacctggtgtccacggatctgcaattttctcaagaggagaaacacaagcattatctaca
gtaactttaggttcatcattagatgttaataaaattgataatgttattatacaagataaa
caaaaattttatttacattataattttcctcctttttcaactggagaaataaaattatta
aaaggagtctcaagacgagaaattggacatggaaatttagctcaacgtgctttaaaaaat
ataattccttttgataatccttatactataagagtagtatcagatgtgttagaatcaaat
ggatcttcttctatggctactgtatgtgctagtacattagcattaatggatgcaggaata
cctattaaaagacctgtatcaggaatatctatggggttaatttttaataaatttacaggt
gaagccttaattctttcagatctcttaggagatgaagataatataggggatatggatttt
aaaattacagggacaaaatatggtatgacagcatgtcaaatggatattaaaatttctgga
atatcatatgatattttattaaaaaccattttaaaagcaaaaaaaattataatatttatt
ataaataatatgcttactactttaaatgctcctagaatttcacttaaacctactgctcct
aaaatatatacttttaatataccaaaaacttttataggtgctgtaattggtcctggagga
aaaatcatacaagaaatacaatcttcaacagaaacttctataaaaatagaagaaaaagaa
aatttaggtaaaatagaaattttaggaaaaaattataataaaataaaagatgctattgaa
aaaatacaatctattgtttttttaccaaaaataggaaaaatttataaagcaaaagttaaa
tatattaaaccttttggtgtttttgttgaactttctaaaggaatagagggcttattacat
atatctgaaatttcttggaagaaattaactaatttagaaaattatataaaaataggacat
ttcataaatgttaaatatttaggaaaaaataataaaaatggaaaaataaaattatctcat
aaaattcttttatctcgtaaatag
DBGET
integrated database retrieval system
