Candidatus Karelsulcia muelleri PSPU: SMPSPU_265
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Entry
SMPSPU_265 CDS
T03672
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smup
Candidatus Karelsulcia muelleri PSPU
Pathway
smup03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smup00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMPSPU_265 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smup03021
]
SMPSPU_265 (rpoA)
03400 DNA repair and recombination proteins [BR:
smup03400
]
SMPSPU_265 (rpoA)
Enzymes [BR:
smup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMPSPU_265 (rpoA)
Transcription machinery [BR:
smup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SMPSPU_265 (rpoA)
DNA repair and recombination proteins [BR:
smup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SMPSPU_265 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BAO66411
UniProt:
A0AAD1B0E2
LinkDB
All DBs
Position
260573..261574
Genome browser
AA seq
333 aa
AA seq
DB search
MFFSSFTKNKNLIILKLTPEEGSFKIEPLYPGWGLTIGNSLRRVLLSSLEGYAISSVKIE
GVNNEYSTIKGVIEDMTEIILNLKKIRFKKKIEDEDFESAEFNIIINNNKKEITAGDLGE
FINLFEIINPYLIILNKEKLISLKITLVIKRGIGYIPSEKNQDMPNIIGTIPIDTIFTPI
KKVKYKIDNCSINTNPFYESLILKIKTDGSINPRKALTRASNLLIRHFQCLSNEKILLEY
KKPKKRNKYDKKILKMRKLLKSSLEEEIDYLSVRTLNCLKSAKIFTWGDLVKYNKSDLLK
LKNFGRKSLSELDKRMKKLNIYSGMDISIYKLN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtttttttcaagttttacaaaaaataaaaatttaataatattaaaattaactcctgaa
gaagggtcttttaaaatagaaccattatatcctggatgggggttaacaattggaaattca
cttagaagagtacttttatcttctttagaaggatatgctatatcatcagttaaaattgaa
ggagtaaataatgaatattcgacaataaaaggggtaatagaagatatgaccgagattatt
ttaaatcttaaaaagatacgttttaaaaaaaaaatagaagatgaagatttcgaatcagca
gaatttaatattattattaataataataaaaaagaaataactgctggtgatttaggtgaa
tttattaatttatttgaaattataaatccttatttaattattttaaataaagaaaaatta
atttctttaaagattactcttgtaataaaaagagggataggttatattccttcagaaaaa
aatcaagatatgcctaatataataggaacaattccaattgatactatatttactcctata
aaaaaagttaaatataaaatcgataattgtagtatcaatacaaatccattttatgaaagt
cttattttaaaaataaaaactgatgggtctataaatcctcgaaaagcattaactagagct
tctaatctattaataagacattttcaatgtctgtcaaatgaaaaaatattattagaatat
aaaaaaccaaagaaaagaaataaatatgataaaaaaattttaaaaatgcggaaactttta
aaatcttcattagaagaagaaatagattatttatctgtaagaactttaaattgtttaaaa
tctgctaaaatctttacatggggagatttagttaaatataataaatcggatttattgaaa
ttaaaaaattttggaagaaaatctttatctgaattagataaaagaatgaaaaaattaaat
atatattctggcatggatatttctatatataaattaaattaa
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