Simonsiella muelleri: BWP33_11435
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Entry
BWP33_11435 CDS
T05344
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
smur
Simonsiella muelleri
Pathway
smur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BWP33_11435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smur03021
]
BWP33_11435
03400 DNA repair and recombination proteins [BR:
smur03400
]
BWP33_11435
Enzymes [BR:
smur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BWP33_11435
Transcription machinery [BR:
smur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BWP33_11435
DNA repair and recombination proteins [BR:
smur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BWP33_11435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AUX62348
UniProt:
V9H5Q8
LinkDB
All DBs
Position
2308100..2312269
Genome browser
AA seq
1389 aa
AA seq
DB search
MSYTFTEKKRIRKSFAKRETVLDVPYLLTTQLESYEKFLQQGRAYDQRLNDEGLQAAFTS
IFPILSNNGYAELDFVHYVLGEPLFDIPECQLRGITYAAPLRARIRLKIYDKETPVESKT
IKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHASGKLLFS
ARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLRALGYSDEQMLDMFYDKETYYLG
KNGVQTDLIAERLRGEIAKFDIVDDNGKVLVNAKNVRDIQAAGLKRLTVEPDALIGKTLA
RDVIVAETGEVMAKANSEITEELLAQLDINNIKEIQTLFVNETSAGNYISATLRTDETAD
QTAARVAIYRMMRPGEPPTEDAVEALFKRMFFQEETYDLSRVGRMKFNTRTYEQKLLPEQ
IGNWYERLLNDMSEKTDKISFILSNEDIVMTIATLVELRNSHGEVDDIDHLGNRRVRSVG
ELVENQFRSGLARVERAVKERLNQAESEGLMPTDLINAKPVSAAIKEFFGSSQLSQFMDQ
TNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSV
YARTNEYGFLETPYRRVIDGKVTNEIDYLSAIEEGRYVIAQANSELDSSGCLKTDQLITC
REKGETILATADRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRAE
KPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVVRVHDEEATAEHGGVDIYNLVKF
TRSNQSTNINQRPAVNAGDVLQKGDLIADGASTDLGELALGQNMTIAFMPWNGYNYEDSI
LISERVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSEKMQNRLDESGIVYIGAE
VEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTR
EGIQRDKRAQSIIEVELKRYRQDLNDQIRIFDNDAFDRIERMIVGQKANGGPNKLAKGKE
ITSEYLRELPSRHDWFDVRVADEDIAKQMELIKLSLQQKRQEAEELYEVKKRKMTQGDEL
PPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRTVDIVLNPLG
VPSRMNIGQILEVHLGWAAKGIGQRIDKMLAEQRKVSELRDFLNKLYNGSGKKEDLDSLS
DDEIITLAENLRRGATFASPVFDGAKEQEIYEMLNLAYPSEDPDIQKLGFNDTKTQITLY
DGRSGEAFDRRVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEM
EVWALEAYGAAYTLQEMLTVKSDDVTGRTKMYENIVKGEHKIDAGMPESFNVIVKEIRSL
GLDIDLEQN
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgagttacacctttaccgaaaaaaagcgtattcgcaaaagttttgccaaacgcgaaacc
gttttggacgtgccttaccttttgactactcagcttgaatcatatgaaaaattcttgcaa
caaggtcgcgcctatgaccaacgtcttaatgacgaaggtcttcaggctgctttcacgtct
attttcccgattttaagtaataatggctacgcagaattggatttcgtgcattatgttttg
ggcgagccattatttgatattcctgaatgtcaattgcgtggtatcacttatgctgcacct
ttgcgtgcgcgtatccgcttgaaaatttacgataaagaaacacccgtagaaagcaaaacc
atcaaagaagtgcgcgaaaatgaagtctacatgggcgaaatccctttgatgacaccgagt
ggctcatttgtcattaatggtacagaacgtgtgattgtttcgcaattgcatcgctcacct
ggcgtgttttttgaacatgaccgcggtaaaacccatgcttctggtaagttattgttttca
gcacgtattattccctatcgtggctcgtggttagattttgaatttgacccaaaagatttg
ttatatttccgcattgaccgccgccgtaaaatgcccgtaaccattttgttacgcgctttg
ggttatagcgatgaacagatgttggatatgttctatgacaaagaaacctattatttaggc
aaaaatggcgtacaaaccgatttgattgccgaacgtttgcgcggtgaaatcgctaaattt
gatattgtagatgacaatggcaaagttttggttaatgccaaaaatgtacgcgatattcag
gctgctggtttaaaacgcttgactgtggaacccgatgcactgattggcaaaacgttggct
cgcgatgtgattgtggcggaaactggcgaagtgatggcaaaagccaatagcgaaatcaca
gaagaattattggcacaattggatattaataatatcaaagaaattcaaacgctttttgtg
aatgaaaccagcgcaggcaattatatttctgctactttgcgtaccgatgaaaccgccgac
caaaccgcagcgcgcgtcgccatttatcgcatgatgcgccctggtgaaccacctacagaa
gatgcggtagaagccttgtttaagcgtatgtttttccaagaagaaacttatgatttgtcg
cgtgtggggcgcatgaaattcaatacgcgtacttatgaacaaaaattgctgcctgaacaa
atcggcaattggtacgaacgtttgttgaatgatatgtcggaaaaaaccgataaaatcagc
ttcattttaagcaatgaagacatcgttatgaccatcgcgactttggtggaattgcgcaac
agccacggtgaagtagacgatattgaccacttaggtaaccgccgcgtgcgttctgtcggc
gaattggtggaaaatcaattccgtagcggtttggcgcgtgtagaacgtgctgtaaaagag
cgtttgaatcaagccgaaagcgaaggtttgatgcccaccgatttgattaacgccaaaccc
gtctctgctgcgattaaagagtttttcggttctagccaattgtcgcaatttatggaccaa
accaacccattgtctgaaattacacacaaacgccgtgtatctgctttaggtccaggcggt
ttgacgcgtgaacgtgcaggctttgaggtgcgcgacgtacatccaacgcattacggtcgt
gtttgtccaattgaaacgccggaaggtccgaacattggtttgattaactcattgtcggta
tatgcacgtaccaatgaatacggtttcttggaaacgccttaccgccgcgtgattgatggc
aaagtaaccaatgaaattgactatttgtctgcaattgaagaaggtcgctatgtgattgcg
caggcaaactctgaattggattcttcaggctgcctgaaaaccgaccaattaattacttgt
cgtgaaaaaggcgaaaccattttggcaaccgccgaccgcgtgcaatatatggacgtggca
acaggtcaagtggtatcggtggctgcatcgttgattccattcttggaacacgatgacgcg
aaccgtgccttgatgggtgcgaacatgcaacgtcaagccgtcccttgtttgcgtgctgaa
aaaccgatggtgggtacaggcattgagcgttctgtggctgtggacagcgcgactgcaatc
gtagcgcgtcgtggcggcgtggtggaatatgtggacgctaaccgtgtagttgtgcgtgta
cacgatgaggaagcaacagcagaacatggcggtgtggatatttacaatttggttaaattc
acgcgctctaaccaatccacaaacatcaaccaacgcccagccgtaaacgctggcgatgta
ttgcaaaaaggcgatttgattgccgatggtgcatcaaccgacttgggtgagttggcactt
ggtcaaaacatgacaattgccttcatgccatggaacggctacaactacgaagactccatt
ttgattagcgaacgcgtggcggctgatgaccgttacacgtcaattcacattgaagaatta
aacgtagtggcacgcgataccaagttgggcgcggaagacattacccgtgatattccaaac
ttgtcagaaaaaatgcaaaatcgtttggatgaatcgggcatcgtgtacattggcgcggaa
gtggaagcaggcgacgtattggttggtaaagtaacaccaaaaggcgaaacacaactcaca
ccagaagaaaaattgttacgcgccattttcggtgaaaaagcgtctgacgtaaaagacacg
tctttgcgtatgccaacgggcatgagtggtacggtgattgatgtgcaggtgttcacacgc
gaaggcattcaacgcgacaaacgcgctcaatccattattgaagtggaattgaaacgctat
cgccaagatttgaacgaccaaattcgtatttttgacaatgacgcatttgaccgtattgag
cgcatgattgtgggacaaaaagccaacggcggtccgaacaaattagctaaaggcaaagaa
atcacatctgaatatttgcgtgaattgcctagccgtcatgattggtttgacgtacgcgtt
gccgatgaagacatcgccaaacaaatggaattgattaaactttcattgcaacaaaaacgc
caagaagcggaagagttgtatgaagtgaaaaaacgcaaaatgacacaaggtgatgaattg
ccgccaggtgtacaaaaaatggtgaaagtgtttatcgccatcaaacgccgcttgcaggca
ggcgataaaatggcgggtcgccacggtaacaaaggtgtggtatcgcgcatcttgcctgtc
gaagacatgccatatatggcggacggtcgcacggtggatattgtgttgaacccattgggc
gtaccttcacgtatgaacattggtcagattttggaagtacacttgggttgggcggcaaaa
ggtattggtcagcgcattgataaaatgctggctgaacaacgcaaagtcagcgaattgcgc
gatttcttgaacaagttgtacaacggtagcggtaaaaaagaagatttggacagtttgagc
gatgacgaaatcatcacgctggctgaaaatttacgccgtggcgcaacatttgcatcgcca
gtatttgacggtgcgaaagagcaagaaatttacgaaatgttgaatttggcgtacccaagc
gaagaccccgatattcaaaaactgggtttcaatgacaccaaaacgcaaatcactttgtat
gatggacgttcgggcgaagcgtttgaccgccgtgttaccgtgggcgtgatgcattatttg
aaactgcaccacttggttgatgagaaaatgcacgcacgttctactggcccgtactctttg
gtaacgcaacagccgttgggtggtaaagcgcaattcggtggtcagcgtttcggtgagatg
gaggtgtgggcgttggaagcatacggcgcggcgtacaccttgcaagaaatgttaacggtt
aaatccgatgacgtaacaggccgcaccaaaatgtacgaaaacatcgtcaaaggcgaacac
aaaattgatgcaggtatgcccgagtcgtttaatgtgattgtcaaagaaatccgttcgctg
ggcttggatattgatttggaacagaattga
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