Simonsiella muelleri: BWP33_12045
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Entry
BWP33_12045 CDS
T05344
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
smur
Simonsiella muelleri
Pathway
smur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWP33_12045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smur03019
]
BWP33_12045
Enzymes [BR:
smur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BWP33_12045
Messenger RNA biogenesis [BR:
smur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWP33_12045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AUX62455
UniProt:
U6Q236
LinkDB
All DBs
Position
complement(2425424..2426773)
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AA seq
449 aa
AA seq
DB search
MSQFSQLGLGQEITSALAEQGYETPTPIQATAIPKALAGHDLLAAAQTGTGKTAAFMLPS
LERLKRYANASTSPAMHPVRMLVLTPTRELADQIDQNTQNYIKNLPLRHTVLFGGVNMDK
QTTDLRTGCEIVVATVGRLLDHIKQKNINLNKVEIVVLDEADRMLDMGFIDDIRQIMQML
PRPRQTLLFSATFAPAIRKLAQDFMNSPETVEVAAQNATNANVEQHVIAVDAYRKRELLE
RLIVDLQMPQVIVFCKTKQSADQVARDLVRRGLSANAIHGDKSQQTRLDVLSQFKSGELR
VLVATDVAARGLDIAELPFVINYELPTQAEDYVHRIGRTGRAGADGVAISMMDDNEQKMY
FSINELIGQELPISKIEGFEPRWEMGDEPTSGSLKSEKTISKTPNRVERKFAKTKAEAIT
YPKIEGRSTRRRGLERRTCALLQRNFGAI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattttcacaactcggactcggacaagaaatcacgtccgcactcgccgaacaa
ggctacgaaacacccacccccattcaagctaccgccatccccaaagcattagcaggacat
gatttactcgccgccgctcaaacaggcacaggcaaaaccgctgcatttatgttgcccagt
ttggaacgcctaaaacgctacgccaatgccagcacatcgcctgccatgcaccccgtacga
atgctcgtgctgacacccacgcgcgaattagccgaccaaattgaccaaaatacccaaaat
tacatcaaaaatctgccattgcgccacactgttttatttgggggcgtaaacatggacaaa
caaaccaccgatttacgcacaggttgcgagattgtcgtggcaaccgttgggcgattgctt
gaccacattaaacaaaaaaacatcaatttaaacaaagtggaaattgttgtgctggacgaa
gctgaccgaatgctggacatgggttttattgatgatattcgccaaatcatgcaaatgttg
ccgcgcccacgccagacgttgctgttttcagcgacttttgcacccgctattcgcaaattg
gcgcaagattttatgaactcacctgaaaccgtggaagttgctgcgcaaaacgccaccaat
gccaatgtagaacaacatgttatcgcagttgatgcctatcgcaaacgcgaattattggaa
cgtctgattgtagacttgcaaatgccgcaagtgattgtattttgtaaaaccaaacaatct
gccgaccaagtggcacgagatttggtaagacgtggtctatccgcgaatgcgattcacggc
gacaaatcgcaacaaacgcgtttggacgtacttagccaattcaaatccggcgaattacgc
gtacttgtggcgaccgatgtcgcagcgcgtggtctggacattgcagaattgccgtttgtg
attaattacgaattgccgactcaagcagaagattacgtccaccgtatcgggcgcacagga
cgcgcaggcgcagatggcgtggcaatttccatgatggacgacaacgaacaaaaaatgtat
ttttcaatcaatgaactgattgggcaagaattaccgatttctaaaattgaaggatttgaa
ccgcgttgggaaatgggcgatgaaccgacttcaggcagcctgaaaagtgaaaaaaccatc
tctaaaaccccaaaccgtgtggaacgcaaattcgccaaaacaaaagccgaagccatcact
tacccaaaaattgaagggcgcagcacgcgcaggcgtggacttgaaagacggacatgtgct
ttgttacaacgcaattttggcgcaatttaa
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