Staphylococcus muscae: C7J88_01495
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Entry
C7J88_01495 CDS
T06215
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smus
Staphylococcus muscae
Pathway
smus03030
DNA replication
smus03430
Mismatch repair
smus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7J88_01495
03430 Mismatch repair
C7J88_01495
03440 Homologous recombination
C7J88_01495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smus03032
]
C7J88_01495
03400 DNA repair and recombination proteins [BR:
smus03400
]
C7J88_01495
Enzymes [BR:
smus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7J88_01495
DNA replication proteins [BR:
smus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7J88_01495
DNA repair and recombination proteins [BR:
smus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7J88_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Med31
Motif
Other DBs
NCBI-ProteinID:
AVQ32933
UniProt:
A0A240C2H0
LinkDB
All DBs
Position
314844..318035
Genome browser
AA seq
1063 aa
AA seq
DB search
MVAHLNIHSAYDLLNSTLTVKSAVERAKAAGYSAVALTDLNVMYGIPQFYNVCQEAGIKA
LLGMTIHVTDHLTQRETIIIAKNNDGLQRLFKLSTDIKVQHQAEVDIADLPSYVEDTVII
FKNMHDDTIDWLTHLPNSTTIYVDETSSSYEAYPKVWARPAYCAYLEDREALKTLAAIRD
NTKVNLIEQQHEPATHIIDVETLKEHQVQEALLSSTDDIAALCDAHIQYHQSLLPEFQTP
NGETANEYLWQKLTTALAERQLQTKDYQERLDYEFDVITRMGYADYFLIVSDLIGYAKDN
GILVGPGRGSSAGSLVSYLLNITTIDPLRYDLLFERFLNPERVTMPDIDIDFEDTQREKV
IRYVQEKYGEFRVSGIITFGHLLAKAVARDVGRVIGFDEPTLSEASKLISMSGQQTLKEA
YHFEPFQTFVKRNHLHEKWYELCCQLESLPRNTSTHAAGVIVNDRPLYESVPLTEGDTGL
LTQWTMTEAEQIGLLKIDFLGLKNLTIIHQIIKQVSRDRDIHIDIEQIPFDDKDVFAMLS
KGETTGIFQLESQGVRDVLKRLQPEHFEDIVAVTSLYRPGPMDEIPTYITRRHDPQQVQY
LHPDLAPILSRTYGVIIYQEQIMQIASQFAGFSYGEADILRRAMSKKNRSILESERQHFI
DGAAKKGYDNALSGQIFDLILKFANYGFPRAHAVSYSKIAYIMSYLKVHFAPYFYANILT
NVINNEDKTAQFIQEAKQHQIKIHAPNINHSQWRYVATREGMYISLGAIKGVGYHSVQAI
ISERIENGQFKDFFDFCDRIPNRIRTRRLLEALIFAGALDCFGKNRATLLQSIDLIADTS
SEVDQSLIEHFATVKKEYHDTDEMPDEQLSAYEKEYLGFYVSLHPIEKLFLKKQYLGIHR
IHKQALNQPILVTIERSRVIRTKSKGQQMAFLTLNDGQQTIEGVVFPSVFQQLSFKLEPQ
APYVIHGKFEWRQGQRQIIINQLVPLNTFEVEKLKHIQQIVIRKELSDEVTNRYLTATSR
TSIPVSYFDEQSNRMTQIGVIDNQHDRLESFIQLFEPNDIRLL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggttgcacatttgaatattcattcggcatatgacttgttgaattcgacgttgacggtg
aaaagtgcggttgaaagagcaaaagcggctgggtattcagcagtcgcattaactgattta
aatgttatgtatggcattcctcagttttacaatgtgtgccaagaagcagggataaaagca
ttgcttggtatgacaatccatgtcaccgatcatttgacacaacgcgaaacaatcattatt
gccaaaaataacgatggtttacaacgattgttcaaactctctactgatatcaaagtgcag
catcaagcagaagtagatattgctgatttgccaagttatgttgaagatacggttatcatt
tttaaaaatatgcatgatgacacaatcgattggctaacacatttgccaaactctacgact
atatatgttgatgaaacatcatcatcctatgaagcttatcctaaagtgtgggctcggcct
gcttattgtgcatatctagaagatcgagaagcgcttaaaacattggcagcaatacgtgac
aatacgaaagtcaacttgattgaacaacagcatgaacctgcaacacatattattgacgta
gaaacgttaaaagagcatcaggttcaagaagctttattgtcaagtacggatgatattgca
gcgctttgtgatgcgcacatacaataccatcaatcgttgttaccagagtttcaaacgcca
aacggtgaaacggcaaatgaatatctgtggcaaaaactcacgacagcattagcagaacga
caattgcagacaaaagattatcaagaacgactggattatgagttcgatgtcattacgaga
atgggttatgcggattactttcttattgtaagtgatctcattgggtatgcgaaggataac
ggaattctcgtcggtcctggtcgtggttcgtcagcgggatcattagtcagctatttatta
aatatcacgacgattgacccgttgcgttatgacttgctatttgagcgttttttaaatcct
gaacgagtaacaatgccggatattgatatcgattttgaagacacacaacgtgaaaaagtt
attcgttacgtccaagaaaaatacggggaatttcgtgtgtcaggtattattactttcggt
catttattagcaaaagctgttgcacgtgatgttggacgtgttatcggttttgacgaacca
acgttgagtgaagcttcaaaacttatctctatgagtggacaacaaacattaaaagaagca
tatcatttcgagccttttcaaacatttgtaaaacgcaatcatctacacgaaaaatggtac
gagctttgttgccagctagaaagtttaccacgtaatacgtcaacgcatgccgcaggtgtc
atcgtcaacgatagaccattatacgagtcggttcctttaactgaaggggatacaggatta
ttaacccaatggacgatgacggaagcggaacaaattggcttgttgaaaattgacttttta
ggattgaaaaatttaacgattattcatcaaattattaagcaagtttcacgggatagagat
attcatattgatattgaacagattccatttgatgataaggatgtttttgcgatgctctca
aaaggtgaaacaactggtattttccagttggagtcacaaggtgttagagatgtgttaaag
cgactgcaacctgagcattttgaagatattgttgcggtgacttcgctttatcgtcccggt
ccaatggatgaaattccaacgtatattacacgtcgtcatgatccacaacaagtgcagtac
cttcatccagacttggcacctatcttgtcccgtacatatggcgttattatttatcaggaa
caaatcatgcagatagccagtcaattcgctggatttagttatggtgaagcggacatatta
agacgtgcgatgagtaaaaagaatcgatctattcttgagagtgaacgacaacacttcatt
gatggtgcagcaaagaagggttacgacaatgcgcttagtggacaaatatttgatttgata
ctcaaatttgccaactacggttttccacgtgcccacgcagtaagttactctaagatagct
tatatcatgtcataccttaaagtgcactttgccccttatttttatgcaaacattttaacg
aatgttatcaataatgaagataaaacggcgcaatttatacaagaagctaaacaacatcaa
ataaagattcatgcgcctaacatcaatcacagtcaatggcgctatgttgcgacacgagaa
gggatgtatatctcgctcggtgccatcaaaggggttgggtatcacagtgtgcaagcaatc
atcagtgaacgcatcgaaaacggtcagttcaaagacttttttgatttttgtgatcgcata
cctaatcgcattcgtacgagacgtttgttagaagcgttgatttttgctggggcgctcgat
tgtttcggtaaaaatcgtgctactttattacagtcgattgacctgattgctgatacgagt
tctgaagtagatcagtcacttattgagcattttgcgacggtgaaaaaagaatatcacgat
accgatgaaatgcctgatgaacagcttagcgcatatgagaaagaatatttggggttttat
gtgtcactacatccaattgaaaaattatttttgaaaaagcaatatttaggtattcaccgc
attcataagcaagcgctgaatcaacccattctcgttacaatagaacgttcaagagtgatt
cgaacaaagtcgaaagggcaacaaatggcctttttaacattaaatgacggtcaacaaacg
atagaaggcgttgtgtttccatctgtattccaacaactatcttttaaattggagccacaa
gccccttatgtcattcatggtaagtttgaatggcgtcaaggacaacgtcaaatcatcatt
aaccaacttgtgccattaaatacatttgaagtagaaaaattaaaacatattcaacaaatt
gtcatacgaaaagaactttccgatgaggtaacaaatcgttatttaacagcgacaagtcgt
acaagtattcctgtctcatattttgatgaacaatcaaatcggatgacacaaatcggcgtt
atcgataatcaacacgatcgtttagaatcatttatacaattatttgaaccaaacgatatc
cgtttattataa
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