Staphylococcus muscae: C7J88_04420
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Entry
C7J88_04420 CDS
T06215
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smus
Staphylococcus muscae
Pathway
smus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7J88_04420 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smus03019
]
C7J88_04420 (groL)
03110 Chaperones and folding catalysts [BR:
smus03110
]
C7J88_04420 (groL)
03029 Mitochondrial biogenesis [BR:
smus03029
]
C7J88_04420 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smus04147
]
C7J88_04420 (groL)
Enzymes [BR:
smus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C7J88_04420 (groL)
Messenger RNA biogenesis [BR:
smus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C7J88_04420 (groL)
Chaperones and folding catalysts [BR:
smus03110
]
Heat shock proteins
HSP60 / Chaperonin
C7J88_04420 (groL)
Mitochondrial biogenesis [BR:
smus03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C7J88_04420 (groL)
Exosome [BR:
smus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C7J88_04420 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C7J88_04420 (groL)
Exosomal proteins of breast cancer cells
C7J88_04420 (groL)
Exosomal proteins of colorectal cancer cells
C7J88_04420 (groL)
Exosomal proteins of bladder cancer cells
C7J88_04420 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AVQ33455
UniProt:
A0A240C5U8
LinkDB
All DBs
Position
complement(895156..896775)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKELKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFGAPLITNDGVTIAKEIE
LEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGIRQGID
KAVGIAVEALHDISQKVENKEEIAQVGAISAANEEVGRYISEAMEKVGNDGVISIEESNG
FNTELDVVEGMQFDRGYQSPYMVTDSDKMTAELENPYILITDKKISSFQDILPLLEQIVQ
SSRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVIT
DDLGLDLKETSIDMLGTASKVEVTKDNTTVVDGNGDPTNIDARINQLKAQIDETDSDFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNI
YKNIEAIEAEGDVATGVNIVLKALQAPVRQIAENAGLEGSVIVEQMKNAEPGVGYNAATD
EWVNMLDAGIVDPTKVTRSALQHAASVAAMFLTTEAVVANIPEDKGNDMPAMGGMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaacttaaattttcagaagatgcacgccaagcgatgttacgtggcgttgat
caattagcaaatgctgtaaaagttacaatcggaccaaaaggacgtaacgtcgttttagat
aaagagtttggtgcaccattgattacaaatgatggtgtcacaatagcaaaagaaatcgag
ttagaagatccatatgaaaacatgggggcaaaactcgtccaagaagtcgcaaataaaacg
aacgagattgctggtgacggaacaacaacagcaactgtacttgcacaagcaatgattcaa
gaaggtctgaaaaacgtcacaagtggtgcaaaccctgtcggaattcgtcaagggattgat
aaagctgttggcatagcagttgaagcattacatgacatatctcaaaaagttgaaaataaa
gaagaaattgcgcaagtaggtgctatttctgcagcgaatgaagaagttggacgttacatt
tctgaagcgatggaaaaagttggcaacgatggggttatctctatcgaagaatcaaatggt
ttcaacacagaacttgatgtcgttgaagggatgcaatttgatcgtggttatcaatcaccg
tatatggtgacagattctgacaaaatgactgcagaattagagaatccgtatattttaatc
acagacaaaaaaatctcatcattccaagatatcttaccgttattggaacaaatcgttcaa
tcaagtcgtccaattttaattgttgcagatgaagttgaaggcgatgcattgacgaacatc
gtgttgaaccgcatgcgtggtacattcacagcagttgcagtgaaggcaccaggatttggt
gatcgtcgtaaagcaatgttagaagacttagctatcttaacaggtgcacaagtcattaca
gatgatctcggtttagacttgaaagaaacatcaatcgatatgcttggaacagcaagcaaa
gttgaagtgacaaaagacaatacaacagtagtagacggtaatggtgatccaacaaacatc
gatgcacgcatcaatcaattgaaagcacaaatcgatgaaacagattcagactttgatcga
gaaaaactacaagaacgtcttgcaaaattagcaggcggagtggcagtgattaaagtaggt
gctgcaacagaaacagaattaaaagaacgcaaattgcgtattgaagacgcattgaactca
acacgtgcagcggtagaagaaggtatcgttgcaggtggtggtacagcattgatgaatatt
tacaaaaatatcgaagccatcgaagcagaaggtgatgttgcaacaggtgttaacattgtg
ttgaaagcattacaagcgcctgtacgtcaaatcgctgaaaatgcaggtttagaaggttct
gttatcgtggaacaaatgaaaaatgcagaaccaggtgtcggttacaatgctgcaactgat
gaatgggtaaacatgcttgatgcgggtattgtggatccgacgaaggttacacgttctgca
ttacaacacgcagcaagtgtggcagcgatgttcttgacaacagaagccgtagttgcaaat
attcctgaagataaaggcaatgatatgccagcaatgggcggcatgccaggcatgatgtag
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