Staphylococcus muscae: C7J88_08165
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Entry
C7J88_08165 CDS
T06215
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
smus
Staphylococcus muscae
Pathway
smus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C7J88_08165 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smus03021
]
C7J88_08165 (rpoC)
03400 DNA repair and recombination proteins [BR:
smus03400
]
C7J88_08165 (rpoC)
Enzymes [BR:
smus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C7J88_08165 (rpoC)
Transcription machinery [BR:
smus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C7J88_08165 (rpoC)
DNA repair and recombination proteins [BR:
smus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C7J88_08165 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AVQ34136
UniProt:
A0A240BTS9
LinkDB
All DBs
Position
1674350..1677967
Genome browser
AA seq
1205 aa
AA seq
DB search
MIDVNKFHYMKIGLASPEKIRKWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
SCGKYKRVRYKGMICDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRSLEEVIYFASYVVVDPGPTGLEKKSLLSEAEYRDYYDKFPGQFTAKMGAEGIKDLLE
EIDLDEELRLLRDELESATGQRLTRAIKRLEVVESFRNSGNNPAWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPNLKMYQCGLPKE
MALELFKPFVMKELVQREIATNIKNAKSKIERMEDEVWDVLEDVIVEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGLLFNDTNEVLKAYANGYVHLHTRIGVQ
AGSFNNPTFTEEQNRKILTTSVGKVIFNEIIPDSFAYINEPTATNLEKNTPDKYFVDATE
LGEGGLKEYFEKTDLVPPFNKKFLGNIIAEVFNRFSITDTSMMLDLMKDLGFKYSSKAGI
TVGVADIVVLPDKQEILDESEKLVERVQKQFSRGLLTEEERYNAVIEIWTQAKDRIQEKL
MKSLDKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMI
EPFIERVEGRYSKETIRHPETDKVIIRPDELITAEIAKEITDAGIEQMYIRSAFTCNTRH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITEIEGVVDNITVGKDRQQEIVIKGANETRSYLASGTSRLKVEIGQ
SVERGEVLTEGSIEPKNYLAVAGLTATEAYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHHFTDANRDAFKERKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVSIEKEEATENTES
QLITE
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataaattccattacatgaaaataggactcgcttcaccagaaaaaatc
cgtaaatggtcaagaggtgaagttaaaaaaccagaaacaatcaactaccgtacgttaaaa
ccagaaaaagatggtttattctgtgaaagaattttcggaccaacaaaagactgggaatgt
agttgtggtaagtacaagcgtgtacgttacaaaggtatgatttgtgaccgttgtggtgta
gaagtaacaaaatcaaaagtacgtcgtgagcgtatgggtcacatcgaacttgcagcacct
gtatcacatatttggtatttcaaaggtattccaagtcgcatgggattattattagatatg
tcaccacgttcattagaagaagtcatttactttgcttcatatgttgtggtagatccaggt
ccaacaggtttagagaaaaaatcattactttctgaagcagagtaccgtgactattacgat
aagttccctggtcaattcacagctaaaatgggtgctgagggaatcaaagaccttttagaa
gaaattgacttagacgaagaacttcgacttttacgtgatgagttagaatctgcgacaggt
caacgattgacacgtgcgattaaacgccttgaagttgtagaatctttccgtaactcagga
aacaacccagcttggatgattttagacgtacttccaatcatcccacctgagattcgtcca
atggttcaacttgatggtggtcgttttgcgacaagtgacttgaacgacttataccgtcgt
gttatcaatcgtaacaaccgtttaaaacgtttattagaccttggtgcacctggcatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgttgatgctttaatcgacaacggtcgt
cgtggtcgtccggtaacaggtccgggtaaccgtccactcaaatcattgtcacacatgtta
aaaggtaaacaaggacgtttccgtcaaaacttacttggtaaacgtgttgactattcaggt
cgttcagttatcgccgttggtcctaacttgaaaatgtaccaatgtggtttgccaaaagaa
atggcacttgaactcttcaaacctttcgttatgaaagaattagttcaacgtgaaattgcg
acaaacatcaaaaatgcgaaaagcaaaattgagcgtatggaagacgaagtatgggatgtt
ttagaagatgttatcgttgaacacccagtattacttaaccgtgcaccaacgcttcacaga
cttggtatccaagcattcgaaccaacacttgttgaaggtcgcgcaatccgtctgcatcca
cttgttacaacagcttataacgctgactttgacggtgaccaaatggcggttcacgtacca
ttatcaaaagaagcacaagcagaagcacgcatgttaatgcttgccgctcaaaacatcttg
aaccctaaagacggtaaaccagtcgtaacgccatctcaggatatggtacttggtaactac
tacttaactttagagcgtaaagatgctgtaaacacaggcttgttatttaacgatacaaac
gaagtgcttaaagcttatgcaaatggctatgtacatttgcatacacgtataggggtacaa
gcaggttcattcaataacccaacatttacggaagaacaaaaccgtaaaatcctaacaact
tctgttggtaaagttattttcaatgaaatcattccagattcatttgcatatattaacgaa
ccaacagcgacaaacctagagaagaacacaccagacaaatattttgtcgatgcaactgaa
ctaggtgaaggtggattgaaagaatacttcgagaagacagatcttgtcccaccattcaac
aaaaaattcttaggtaacatcatcgcagaagtgtttaaccgtttcagcattacagataca
tctatgatgcttgacttgatgaaagacttaggattcaagtactcatcaaaagcgggtatt
acagttggtgttgctgacatcgttgtattaccagacaaacaagaaatcttagatgaatca
gaaaaacttgttgaacgtgtacaaaaacaatttagccgtggtttattaacagaagaagaa
cgttataatgcggttattgaaatttggacacaagcgaaagatagaatccaagagaaactg
atgaaatctcttgataaaacaaacccaatctttatgatgagtgactcaggtgcccgtggt
aacgcatctaacttcacgcagcttgcgggtatgcgtggtctgatggccgcaccatctggt
aaaatcatcgaacttcctatcacatcatcattccgtgaaggtttaacagtattagaatac
ttcatctcaactcacggtgcgcgtaaaggtcttgccgatacagcacttaagacagccgac
tcaggttacttaacacgtcgtcttgttgacgttgcacaagatgttatcgtgcgtgaagaa
gattgtggtactgaccgtggtttactcgtttcagatatcaaagaaggtacagaaatgatt
gaaccattcatcgagcgtgttgaaggtcgttactctaaagaaacaattcgtcacccagag
actgacaaagttatcattcgtccagacgaattaatcacagctgaaatcgcaaaagaaatt
acagatgcaggcattgaacaaatgtacattcgctcagcatttacatgtaacacacgtcat
ggtgtatgtgaaaaatgttacggtaaaaacttagcgacaggtgaaaaagttgaagtgggc
gaagcagttggtacgattgccgctcaatcaatcggtgagcctggtactcagttaacaatg
cgtacattccacactggtggggtagctggtagcgatatcacacaaggtttacctcgtatc
caagaaatctttgaagcacgtaacccgaaaggtcaagccgtgatcactgaaatcgaaggt
gtggtagacaacattacagttggcaaagatagacaacaagagatcgtgatcaaaggtgcc
aacgaaacacgttcttaccttgcatcaggtacatcacgcttaaaagtagaaatcggacaa
tctgttgaacgcggtgaagttttaactgaaggttcaattgagccgaaaaattacttggca
gtagctggtttaacagcaactgaagcgtacttacttaaagaagtacaaaaagtttaccgt
atgcaaggtgtagaaattgacgataaacacgttgaagtcatggtacgtcaaatgttacgt
aaagtacgtatcattgaagctggtgatacgaagttattaccaggttcattagtagacatc
catcacttcacagatgctaaccgtgatgcattcaaagagcgtaaacgcccagcgactgca
aaaccagtattacttggtatcacgaaagcgtcacttgaaacagaaagcttcttatctgcg
gcttcattccaagaaacgacacgtgtccttactgacgcagcgatcaaaggaaaacgcgat
gacttactcggcttgaaagagaacgttatcatcggtaagttgattcctgctggtacaggt
atgagacgttatagtgacgtatctatcgaaaaagaagaagcaacagaaaacacagaatca
caactcatcactgagtaa
DBGET
integrated database retrieval system
