Streptococcus mutans GS-5 (serotype c): SMUGS5_01525
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Entry
SMUGS5_01525 CDS
T02185
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
smut
Streptococcus mutans GS-5 (serotype c)
Pathway
smut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMUGS5_01525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smut03019
]
SMUGS5_01525
Messenger RNA biogenesis [BR:
smut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SMUGS5_01525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
SIS_2
Permuted_GreAB-C
Motif
Other DBs
NCBI-ProteinID:
AFM80834
LinkDB
All DBs
Position
complement(326869..328551)
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AA seq
560 aa
AA seq
DB search
MANINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVDNVDRIKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLLRDAK
MYEINHNTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVVCTGDFKFDWTPVGEPADI
HRMAALGEDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMNIIEGIHGRIIFASFASNIFRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKEYHASEIMIMCT
GSQGESMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG
KVNNIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHAGLAIDTGIPKDNIFIMEN
GDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGTAVLRDRHDLSEDGVVLAVATVDFKTK
MILAGPDILSRGFIYMRESGDLIRSSQRILFNAIRIALKNKEASIQSVNGAIVNALRPFL
YEKTEREPIIIPMILTPDKS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatattaatttaaaacctgaagaagttggcgtttatgctattggaggtctaggt
gagattggtaaaaatacttacggtattgaataccaagatgaaatcatcattgttgatgca
gggatcaaattccctgaagacgatctgctcggtattgactatgttattcctgactattct
tatattgttgacaatgtggatcgtataaaagctctcgtcattacacatggacacgaagat
cacattggtgggattccatttctcttaaagcaagccaatatccctatttatgcaggacct
ctggctctagctctcatccgcggtaaattggaagaacacggtctcttgcgtgatgctaag
atgtatgaaattaatcataatactgagttaacctttaaaaatcttagcgtcacttttttc
cgaacaactcactcaattccagagcctctaggaattgtcattcatactcctcaaggtaaa
gttgtctgtacaggtgactttaaatttgattggacacctgttggtgagccagcagatatc
caccgcatggccgcactgggtgaagatggcgttctttgtctcttatctgattcaaccaat
gccgaaatcccaacttttaccaattctgaaaaagtggttggccagtccattatgaatatc
atcgaaggtattcatggacgtattatatttgcatcctttgcttcaaatatttttcgttta
caacaggctgcagaagctgctgtcaaaacaggccgtaaaattgccgtctttggacgttcg
atggaaaaagctattgtcaacggtattgaactgggttatataaaagtacccaaggggact
tttatagagccaaatgaaatcaaagaatatcatgctagtgaaatcatgataatgtgtaca
ggcagtcagggagagtctatggcagctctttcacgaattgccaatggaacacacagacaa
gttcaattgcagcccggtgataccgtcattttctcatctagcccaattcctggtaataca
actagtgttaataagctgatcaataccattcaagaagctggtgtagaagtcatccatggt
aaggtcaataatattcacacatcaggacacggcggacaacaagaacaaaaattgatgctg
cgccttataaaacctaaattcttcatgcctgttcatggggaataccgcatgcaaaaggtt
catgccggcttagctattgataccggtatccctaaagacaatattttcatcatggaaaat
ggtgatgtcctagctctaaccaaagattctgctagacgtgccggtcatttcaatgcgcaa
gatatttatgttgacggtaatggtattggtgatattggtacagcggttctgcgcgaccga
catgatctttctgaagatggtgttgtcttagcagtagcaactgttgattttaaaaccaaa
atgattttagctggcccagatattctcagccgcggtttcatttatatgcgtgaatctggt
gatctcattcgcagcagtcaacgcattcttttcaatgcgattcgtatcgctctaaaaaat
aaagaagccagcattcaatcggtcaatggcgctattgtcaatgcactacgcccattttta
tatgaaaaaacagaacgcgaacctattatcattcctatgatattgacaccagataagtct
taa
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