KEGG   Streptococcus mutans GS-5 (serotype c): SMUGS5_02685
Entry
SMUGS5_02685      CDS       T02185                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
smut  Streptococcus mutans GS-5 (serotype c)
Pathway
smut03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SMUGS5_02685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smut03019]
    SMUGS5_02685
   03009 Ribosome biogenesis [BR:smut03009]
    SMUGS5_02685
Enzymes [BR:smut01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SMUGS5_02685
Messenger RNA biogenesis [BR:smut03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SMUGS5_02685
Ribosome biogenesis [BR:smut03009]
 Prokaryotic type
  rRNA helicases
   SMUGS5_02685
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD AAA_22
Other DBs
NCBI-ProteinID: AFM81062
LinkDB
Position
564910..566463
AA seq 517 aa
MKFTELHLAEDILSAVAKVGFVEPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIDVTNNVVQALVIAPTRELAVQSQEELFRFGREKKVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLNHVETLILDEADEMLNMGFLEDIEAIISRVPETRQTLLF
SATMPDAIKRIGVKFMKEPEHVKIAAKELTTDLVDQYYIRVKENEKFDTMTRLMDVEQPE
LSIVFGRTKRRVDELTRGLKLRGYRAEGIHGDLDQGKRLRVLRDFKNDNLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKHGQSITFVAPNEMGYLQIIEKLTKK
RMKGMKPATAQEAFQASKKVALKKIERDFADEKIRSNFDKFTKDAEKLAAEFSPEELAQY
ILTLTVQDPEMLPKVEIAREKPLPFKFAGKGKGGNRRREDRRGGRDSRRNYRDGGRREFK
RTSNKNRKDFENKSNKRPHRTSSEKKSGFTIRNKGDR
NT seq 1554 nt   +upstreamnt  +downstreamnt
ttgaaatttacagaattacatttggcggaagacattctttctgctgttgcaaaagtcggc
tttgttgagccatcacctatccaagaattgactattcctcttgcccttgaaggaaaagat
gttattggtcaagcacaaactgggacaggaaaaacagcagcctttggtctgccaaccctg
aataagattgacgtgaccaataacgttgttcaagcccttgttattgcgccaacgcgagaa
ttggctgttcaaagtcaagaggagctctttcgttttgggcgtgaaaagaaagttaaagtt
cgttcggtttatggtggttcaagcattgaaaaacaaattaaggctcttaaatcaggagcc
catattgttgttgggacaccgggacgtctgcttgatttgattaaacgcaaggcgcttaaa
ttaaatcatgtggaaacccttattttggatgaagcagatgaaatgctcaacatgggcttt
ttagaagatattgaagccattatttcacgtgtaccagaaacacgccaaaccttgctcttt
tcagcaaccatgccagatgccatcaaacgtattggcgtaaagttcatgaaagaaccagaa
catgttaagattgctgccaaagaattaacaacagatttggtggatcaatattatatccgt
gtcaaggaaaatgaaaaatttgatacgatgacccgtcttatggatgtggaacagccagaa
ctttctatcgtttttggccgtactaagcgccgtgttgatgagttaacaagaggattaaaa
ctgcgtggctatcgtgcggaagggatccatggggatctcgatcaagggaaacgtctgcgt
gttcttcgggattttaaaaatgataaccttgacattttggtcgcgacagatgtggcggct
cgtggtctcgatatttcgggcgtcactcatgtttataactatgatattccgcaagaccct
gaaagttatgttcatcgcattggtcgtacaggtcgtgctggtaagcacggtcagtcaatc
acttttgtggctcccaatgaaatgggctatcttcaaattattgaaaagctcactaaaaaa
cgcatgaaaggcatgaaacccgctacagcgcaagaagcctttcaagcaagcaaaaaagtg
gccctcaaaaagattgagcgtgactttgctgatgaaaagattcgttctaattttgataag
tttaccaaagatgctgaaaaattagctgctgaattttcaccagaagaattagcacaatat
atcttgactctaactgttcaagatccagaaatgctgcctaaggttgaaattgctcgcgaa
aaacccttgccatttaaatttgctggcaaaggaaagggcggcaatcgtcgtcgtgaggat
cgtcggggaggtcgcgacagtcgccgtaattatcgtgacggtggccgtcgtgaatttaaa
cggacttctaacaaaaatcgcaaagattttgaaaataagagcaataaacgtcctcaccgt
acttccagcgaaaagaaaagcggctttaccattcgcaataaaggtgacagataa

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