Streptococcus mutans GS-5 (serotype c): SMUGS5_02685
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Entry
SMUGS5_02685 CDS
T02185
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
smut
Streptococcus mutans GS-5 (serotype c)
Pathway
smut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMUGS5_02685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smut03019
]
SMUGS5_02685
03009 Ribosome biogenesis [BR:
smut03009
]
SMUGS5_02685
Enzymes [BR:
smut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SMUGS5_02685
Messenger RNA biogenesis [BR:
smut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SMUGS5_02685
Ribosome biogenesis [BR:
smut03009
]
Prokaryotic type
rRNA helicases
SMUGS5_02685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFM81062
LinkDB
All DBs
Position
564910..566463
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AA seq
517 aa
AA seq
DB search
MKFTELHLAEDILSAVAKVGFVEPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIDVTNNVVQALVIAPTRELAVQSQEELFRFGREKKVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLNHVETLILDEADEMLNMGFLEDIEAIISRVPETRQTLLF
SATMPDAIKRIGVKFMKEPEHVKIAAKELTTDLVDQYYIRVKENEKFDTMTRLMDVEQPE
LSIVFGRTKRRVDELTRGLKLRGYRAEGIHGDLDQGKRLRVLRDFKNDNLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKHGQSITFVAPNEMGYLQIIEKLTKK
RMKGMKPATAQEAFQASKKVALKKIERDFADEKIRSNFDKFTKDAEKLAAEFSPEELAQY
ILTLTVQDPEMLPKVEIAREKPLPFKFAGKGKGGNRRREDRRGGRDSRRNYRDGGRREFK
RTSNKNRKDFENKSNKRPHRTSSEKKSGFTIRNKGDR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaattacatttggcggaagacattctttctgctgttgcaaaagtcggc
tttgttgagccatcacctatccaagaattgactattcctcttgcccttgaaggaaaagat
gttattggtcaagcacaaactgggacaggaaaaacagcagcctttggtctgccaaccctg
aataagattgacgtgaccaataacgttgttcaagcccttgttattgcgccaacgcgagaa
ttggctgttcaaagtcaagaggagctctttcgttttgggcgtgaaaagaaagttaaagtt
cgttcggtttatggtggttcaagcattgaaaaacaaattaaggctcttaaatcaggagcc
catattgttgttgggacaccgggacgtctgcttgatttgattaaacgcaaggcgcttaaa
ttaaatcatgtggaaacccttattttggatgaagcagatgaaatgctcaacatgggcttt
ttagaagatattgaagccattatttcacgtgtaccagaaacacgccaaaccttgctcttt
tcagcaaccatgccagatgccatcaaacgtattggcgtaaagttcatgaaagaaccagaa
catgttaagattgctgccaaagaattaacaacagatttggtggatcaatattatatccgt
gtcaaggaaaatgaaaaatttgatacgatgacccgtcttatggatgtggaacagccagaa
ctttctatcgtttttggccgtactaagcgccgtgttgatgagttaacaagaggattaaaa
ctgcgtggctatcgtgcggaagggatccatggggatctcgatcaagggaaacgtctgcgt
gttcttcgggattttaaaaatgataaccttgacattttggtcgcgacagatgtggcggct
cgtggtctcgatatttcgggcgtcactcatgtttataactatgatattccgcaagaccct
gaaagttatgttcatcgcattggtcgtacaggtcgtgctggtaagcacggtcagtcaatc
acttttgtggctcccaatgaaatgggctatcttcaaattattgaaaagctcactaaaaaa
cgcatgaaaggcatgaaacccgctacagcgcaagaagcctttcaagcaagcaaaaaagtg
gccctcaaaaagattgagcgtgactttgctgatgaaaagattcgttctaattttgataag
tttaccaaagatgctgaaaaattagctgctgaattttcaccagaagaattagcacaatat
atcttgactctaactgttcaagatccagaaatgctgcctaaggttgaaattgctcgcgaa
aaacccttgccatttaaatttgctggcaaaggaaagggcggcaatcgtcgtcgtgaggat
cgtcggggaggtcgcgacagtcgccgtaattatcgtgacggtggccgtcgtgaatttaaa
cggacttctaacaaaaatcgcaaagattttgaaaataagagcaataaacgtcctcaccgt
acttccagcgaaaagaaaagcggctttaccattcgcaataaaggtgacagataa
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