Streptococcus mutans GS-5 (serotype c): SMUGS5_06440
Help
Entry
SMUGS5_06440 CDS
T02185
Name
(GenBank) putative ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
smut
Streptococcus mutans GS-5 (serotype c)
Pathway
smut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMUGS5_06440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smut03019
]
SMUGS5_06440
Messenger RNA biogenesis [BR:
smut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SMUGS5_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lipase_bact_N
Motif
Other DBs
NCBI-ProteinID:
AFM81787
LinkDB
All DBs
Position
complement(1361770..1363434)
Genome browser
AA seq
554 aa
AA seq
DB search
MSDIKIIALGGVRENGKNFYVAEVNDAIFILDAGLKYPENEQLGVDVVIPNLDYLIENKK
RVQGIFLTHGHADAIGALPYLLSDVKAPVFGSELTIELAKLVVKNNDATKKFHNFHVVDA
QTEIEFDDAIISFFKTTHSIPESLGIVVGTKEGNIVYTGDFKFDQAASKLYQTDLARIAE
IGREGVLALLSDSANADSTVQIASEAEVGIEMEQVISNWEGRIIVAAVASNLVRIQQVFD
SAANNGRRVVLTGYDVENIVRTAIRLKKLSLVDEKLIVKPKDMHKFEDHELIILETGRMS
EPLNGLRKMAIGRHRYVEIKDGDLVYIVTTPTVSKEAVVARVENMIYKAGGDVRLITQDL
RVSGHANGRDLQLMINLLKPKYLFPIQGEYRELAAHADLALEIGMFPENIYIMKHGDIMV
YDKEDGFLHEGGIPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIIALTVNKKEKKIIS
RAKINTRGFVYVRKSRDILRESADIVNKAVENYLQQDTFDWGELKSIVRDEIGKFLFEQT
KRRPAILPVVMEVR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacattaaaattattgccctaggcggagttcgtgaaaatggtaagaacttctat
gtggcagaagtcaacgacgccattttcattcttgatgctgggcttaagtatccagaaaat
gaacagttaggtgttgatgttgttattcctaatctggattatctgattgaaaataaaaag
cgtgtacagggaatttttttaacccatggacatgctgatgctattggtgctttgccttat
ttgttgagtgatgtcaaagctccggtatttggttctgagttaacgattgaactagctaag
ttggtcgttaaaaacaacgatgcaactaagaaattccataatttccatgtggttgatgct
caaactgaaattgaatttgacgatgctattatttcttttttcaaaactacccattctata
ccagaaagtttaggaattgtagttggcactaaagaaggcaatattgtttatacaggtgat
tttaagtttgaccaagcagccagcaagctttatcagactgacttagctcgcattgctgaa
attggacgtgaaggtgttctggcacttttatcagattctgctaatgctgatagcactgtt
caaattgccagtgaagctgaagtaggtattgaaatggagcaagtcatttccaattgggaa
ggacgtattatcgtcgctgcagtagcctctaatcttgttcgtatccaacaagtctttgat
tcggctgctaacaatggccgccgtgttgtgctgacaggttatgatgttgaaaatattgtt
cgaacagctatccgtcttaaaaagctttctctggttgatgaaaaacttattgtcaaacca
aaagatatgcataaatttgaagatcatgaactaattattttagaaactggtcggatgagc
gagccactcaatggtttaagaaaaatggctattggccgtcatcgttatgttgaaattaaa
gatggtgatttggtctatattgtaacaacacctactgtttctaaagaagccgttgttgcg
cgtgttgagaatatgatttataaggctggcggtgatgtgagactcattactcaggactta
cgcgtatctggtcatgctaatggtcgtgatcttcaactgatgattaatctgcttaagccc
aaatatctcttccctatacaaggagaatatcgtgaattagctgcccatgctgatttggct
cttgaaataggcatgtttccggaaaatatttatattatgaaacatggtgacattatggtt
tatgataaagaggatggtttcttacatgaaggcggtatcccggctggagatgtcatgatt
gatggcaatgctattggtgatgttggcaatattgttttacgagaccgcaaggtgctttct
gaagatggtatctttatcattgccttaactgtcaataaaaaagaaaagaaaatcatttca
agagctaaaatcaatacacgtggttttgtttatgtcagaaaaagccgtgatattttacgc
gaaagtgcagatattgtcaataaggctgttgaaaattatttgcaacaagatacgtttgat
tggggagaattgaaatctattgttcgtgatgaaattggtaaatttctttttgaacaaact
aagcgtcgtccagctattttaccagtagttatggaagttagataa
DBGET
integrated database retrieval system
