Streptococcus mutans GS-5 (serotype c): SMUGS5_09000
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Entry
SMUGS5_09000 CDS
T02185
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smut
Streptococcus mutans GS-5 (serotype c)
Pathway
smut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMUGS5_09000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smut03021
]
SMUGS5_09000
03400 DNA repair and recombination proteins [BR:
smut03400
]
SMUGS5_09000
Enzymes [BR:
smut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMUGS5_09000
Transcription machinery [BR:
smut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SMUGS5_09000
DNA repair and recombination proteins [BR:
smut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SMUGS5_09000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SusF_SusE
Motif
Other DBs
NCBI-ProteinID:
AFM82270
LinkDB
All DBs
Position
complement(1874290..1875228)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPIITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTIPGVREDVMQIILNIKGLAVKSYVEEEKIVELDVEGPAEITAGDILTDSDIEIVN
PDHYLFTIAEGANLKATMTVATNRGYVPAEKNKRDDAPVGTLAIDSIYTPVKKVNYQVEP
ARVGSNDNFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKATDVMKETEQ
VSDEKVLDRTIEELDLSVRSYNCLKRAGINTVYDLTEKSESEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggcaga
tttgtcattgaaccacttgaacgtggctatggtacaactctagggaattcccttcgtcgt
gtgctgttgtcttcacttccgggtgcagctgttacatcaattaagattgatggagtacta
cacgaatttgatactatcccaggtgtacgcgaggatgttatgcaaatcatccttaatata
aaaggacttgctgtaaaatcttatgtcgaagaagaaaagattgttgaattagatgttgaa
ggacctgcagaaattactgctggagatattttaacagacagtgatattgaaatagttaat
cctgatcattatctctttactattgctgaaggtgctaatttaaaagcaaccatgactgtt
gcaactaatcgtggttatgttccagcagagaaaaataaaagagatgatgcaccagttggg
acgctcgcgatagattctatctatacgccagttaaaaaagttaattatcaagttgagcca
gctcgtgtgggcagcaatgataactttgataaattaacaattgaaattatgaccaatggc
acaattattcctgaggatgctcttgggttatctgctcgtgttttgattgagcatttaaat
ctttttactgatttaaccgaggtagccaaggcgactgatgtcatgaaagaaacagaacaa
gtttctgatgagaaagtacttgatcgtacgattgaggaacttgatttatcagtgcgttct
tataactgtcttaaacgcgctggtattaatacagtctatgatttaactgaaaagtctgaa
tctgaaatgatgaaagttagaaatcttggacgtaaaagtcttgaagaagttaaagtaaag
cttgcagatcttggtttaggcttgaaaaatgataaataa
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