KEGG   Candidatus Karelsulcia muelleri Sulcia-ALF: SULALF_174
Entry
SULALF_174        CDS       T02783                                 
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
  KO
K03086  RNA polymerase primary sigma factor
Organism
smv  Candidatus Karelsulcia muelleri Sulcia-ALF
Brite
KEGG Orthology (KO) [BR:smv00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SULALF_174 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smv03021]
    SULALF_174 (rpoD)
Transcription machinery [BR:smv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SULALF_174 (rpoD)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 DUF3915 Sigma70_r1_2 Atrophin-1 Sigma70_r4_2 GPW_gp25 DUF6730
Other DBs
NCBI-ProteinID: AGS33437
LinkDB
Position
complement(156668..157753)
AA seq 361 aa
MKKQNLISEREREREREREREREREREPETDPITNGESESLDKFLLEISNLPLLSQEEEF
FWAKLARVGYIYNSEIESIFKKLFKKLKQLKQFQKKSKVILKIKKLTAILRKFPKKGIKK
YAIDNLVKANLRFVISVAKQYQNQGLSLSDLINEGNYGLIKGINRFDERKGFKCISYCVW
WIRQSILQAISDKARCVRYPTNKLAFYNKVNKTYSKLEQKMKMPPSIKYISDYLNVSEKD
VEEALINSIKHTSLDAPALGEGDNSNLYDVIKISESPKTDHSLEKESLQQDIKILLETLS
ERESQIITLHYGLGCFSMNLEKIAYLLRLTRERCRQIEMHAIKRLKKSSRKKRLLSYLCK
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaaaaaacaaaaccttattagtgagcgtgagcgtgagcgtgagcgtgagcgtgagcgt
gagcgtgagcgtgagcgtgagcctgagactgatcctattactaatggagaatctgagtct
ttagataaatttttacttgagataagtaatctcccattattaagtcaagaagaagaattc
ttttgggctaaattagctcgagtaggatatatctataattctgaaatagaatcaatcttc
aaaaaattatttaaaaaattgaaacaattgaagcaatttcaaaaaaaaagtaaagttata
ttaaaaataaaaaaattaaccgctatcttaagaaaatttcctaaaaagggaataaaaaaa
tacgcaattgataatttagttaaagcaaatttaagatttgtaatttctgtagcaaaacaa
tatcaaaatcaaggattaagtttatcagatttaattaatgaaggaaattatggtctcata
aaaggaataaatcgttttgatgaaagaaagggatttaaatgtatttcttattgtgtctgg
tggataagacaatctatcttacaagctatatcggataaagctcgttgtgtacgttatcct
accaacaaactagctttttataataaagttaataaaacatattctaaattagaacaaaaa
atgaaaatgcctccatcaataaaatatattagtgactatttaaatgtaagtgaaaaagat
gttgaggaagctctgataaattcaattaaacatacatctttagatgcccctgctcttggc
gagggagataattctaatttatatgatgttataaaaatttctgaatcacctaaaactgat
cactctttagaaaaagaatctcttcaacaagatataaaaatattattagaaactctttca
gaaagagaatctcaaataattacattacattatggattaggatgtttttcaatgaattta
gaaaaaatagcttatctattaagattaactagagaacgttgccgacaaatagaaatgcat
gcaattaaaagattaaaaaaatcttctcgtaaaaaaagattactatcctacttatgtaag
ttgtaa

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