Candidatus Karelsulcia muelleri Sulcia-ALF: SULALF_205
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Entry
SULALF_205 CDS
T02783
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smv
Candidatus Karelsulcia muelleri Sulcia-ALF
Pathway
smv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SULALF_205 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smv03021
]
SULALF_205 (rpoA)
03400 DNA repair and recombination proteins [BR:
smv03400
]
SULALF_205 (rpoA)
Enzymes [BR:
smv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SULALF_205 (rpoA)
Transcription machinery [BR:
smv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SULALF_205 (rpoA)
DNA repair and recombination proteins [BR:
smv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SULALF_205 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AGS33468
LinkDB
All DBs
Position
174286..174999
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AA seq
237 aa
AA seq
DB search
MFFFKFKQSKNLRVLKLTPVEGLFKIEPLFPGWGVTIGNSLRRVLLSSLEGYAISSVKIE
GVNHEFSTIKGVIEDMTEIILNLKKVRFKKNKKKENFESEVFNMIISNDKEEITAADLGK
YIKKFDILNPDLIILNKQKLISLDLTIVIKKGIGYVTSEENKDNLIGSIPMDSIFTPIKN
VKYKIDNCSLNKNSNYESLLLEIKTDGSLNPRDALTNASNILIQHLKMFIYETRKKK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgttttttttcaaatttaaacaatcaaaaaatttaagagtattaaaattaacacctgta
gaaggtttatttaaaatagaaccgttatttcctggatggggagtaacaattggaaatagt
cttaggagagtgcttttatcgtctttagaaggatatgcaatatcgtcagttaaaattgaa
ggagtaaatcatgaattttctacgataaaaggggtaatagaagatatgacagaaattatt
ctaaatctgaaaaaagtacgttttaaaaagaacaaaaaaaaagaaaattttgaatcagaa
gtatttaatatgataatatctaatgataaagaagaaatcactgctgctgatttaggaaaa
tatattaagaaatttgatatattaaatcctgatttaataattttaaataaacaaaaatta
atatctttagatctaactattgtaataaaaaaagggataggttatgtaacttcagaagaa
aataaagataatttgataggatcaattccaatggattcgatatttactcctataaagaat
gtaaaatataaaatagataactgtagtctcaataaaaattcaaactatgaaagtttgtta
ttagaaataaaaactgatggatctctaaatcctagagatgcattaaccaatgcctctaat
atattaatacaacatttaaaaatgtttatatatgagacacggaaaaaaaaataa
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