Serratia marcescens WW4: SMWW4_v1c00460
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Entry
SMWW4_v1c00460 CDS
T02448
Symbol
malS
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00500
Starch and sucrose metabolism
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SMWW4_v1c00460 (malS)
Enzymes [BR:
smw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
SMWW4_v1c00460 (malS)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AGE15854
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All DBs
Position
complement(48072..50135)
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AA seq
687 aa
AA seq
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MKLLPLPLLILLSPSALAGWTLAGFPAFDETAAGLFASQAALPKGQLPLRLYQDNHCWQP
AEAVKLNQTLSLQPCGAHPPASWRQFRAGDYQVRIDTRSGTPTLQLSLSSAPESAAVAVR
SCPRWDGKPVTVDVASTFTEGETLRDFYSGQTAQVSQGKITLQPAAASGGLLLLESAATA
KPAAFSWHNATVYFVLTDRFENGNPANDHSYGRRSDGLQEIGTFHGGDLAGLTQKLDYLQ
QLGVNALWISSPLEQIHGWVGGGTQGDFPHYAYHGYYALDWTRLDANMGTEQELRTLVEQ
AHQRGIRILFDVVVNHVGYATLADMQTFHFGSLYLQGAEVEKTLGKNWSDWRPGPGQNWH
SFNDYINFSDKAGWRPWWGKNWIRTDIGDYDAPGYDDLTMSLAFLPDIKTEAPGASGLPL
FYRHKPDTAARDMPGATTRDYLTVWLSQWVRDYGIDGFRVDTAKHVEKPTLALLKRRATA
ALAAWKAEHPQQALDDAPFWMTGEAWGHGVMKSDYYQNGFDAMINFDFQDQASQALGCFA
DIDATYRQMAERLQDFNVLSYLSSHDTRLFFASDAKGSQVRQQRAANLLLLAPGAVQIYY
GDESGRPLGPTGSDPLQGTRSDMNWPELQGEKASLLAHWQRLGQFRARHPAIGGGVQTPQ
PHAAYYAFSRRLGDDKVMVVWAGERSQ
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgttacccctgcccttgttgatactgctgtcgccttcggcactggccggctgg
acgttggcgggtttcccggccttcgacgaaactgccgccgggctgttcgccagccaggcc
gcgctgcccaaaggccaactgccgctgcggctgtatcaggataaccactgctggcagccc
gccgaggcggtgaagcttaaccaaacgctgtcgctgcagccctgcggcgcccatccgccg
gccagctggcggcagttccgcgccggcgattatcaggtgcgcatcgacacccgcagcggc
acgccgacgctgcagctcagcctgagcagcgcgccggaaagcgccgccgttgccgtgcgc
agctgcccgcgctgggacggcaagccggtcacggtcgacgtcgcctccaccttcaccgaa
ggcgaaacgctgcgcgatttctattccggccaaacggcgcaggtgagccaggggaaaatc
acgctgcagcccgccgccgccagcggcggcctgttgctgctggaatctgccgccacggcg
aaaccggcggcgttcagttggcataacgccacggtctacttcgtgctgaccgatcgcttt
gagaacggcaatccggccaatgaccacagctacgggcgccgcagcgacggcctgcaggaa
ataggcacctttcacggcggcgatctggccggcctgacgcagaagctggattatctgcag
cagctcggcgtcaacgccttgtggatcagctcaccgctggagcagatccacggctgggtc
ggcggcggcacccaaggcgatttcccgcattacgcctatcacggctattacgcgctggac
tggacgcgcctcgacgccaacatgggcaccgaacaggagctgcgcacgctggtcgagcag
gcccatcagcgcggcattcgcattctgttcgacgtggtggtgaaccatgtcggctacgcc
acgctggcggatatgcaaacgttccacttcggctcgctgtatctgcagggtgcagaggtg
gagaaaaccctggggaaaaactggagcgactggcgccccgggccagggcaaaactggcac
agcttcaacgactacatcaatttcagcgacaaggcgggctggcgcccatggtgggggaaa
aactggatccgcaccgacatcggcgactatgacgcgccgggctatgacgacctgacgatg
tcgctggccttcctgccggacatcaaaaccgaagcgcccggcgccagcggcctgccgctg
ttctatcgccacaaacccgacaccgccgctcgcgacatgcccggtgccaccacccgcgat
tacctgaccgtctggctcagccagtgggtgcgtgattacggcatcgacggttttcgcgtc
gacaccgccaagcacgtggaaaaaccgacgctggcgctgttgaagcggcgcgccacggcg
gcattggcggcgtggaaagcggagcatccgcagcaggcgctggatgacgcgccgttttgg
atgaccggcgaggcctggggccacggggtgatgaaaagcgactattaccaaaacggcttc
gacgcgatgatcaacttcgatttccaggaccaggcgtcgcaggcgctgggctgctttgcc
gacatcgatgccacctaccgacagatggccgagcggctgcaggatttcaacgtgttgagc
tacctctcttcacatgacacccggctgttcttcgccagcgacgccaaaggctcgcaggtg
cgccaacagcgggcggcgaacctgctgttgctggcgccaggggcggtgcagatttactac
ggcgatgaaagcggccgcccgctcggcccaaccggttccgatccgctgcagggcacccgc
tccgacatgaactggcctgagttgcagggggaaaaagcctcgctgctggcccactggcaa
cggttggggcagttccgcgctcgccacccggcgatcggtggcggcgtgcaaaccccgcag
ccgcatgccgcctactatgccttcagccgtcgactcggcgacgataaggtgatggtggta
tgggccggcgaacggtcacaataa
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