Serratia marcescens WW4: SMWW4_v1c01910
Help
Entry
SMWW4_v1c01910 CDS
T02448
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00300
Lysine biosynthesis
smw00470
D-Amino acid metabolism
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
smw01120
Microbial metabolism in diverse environments
smw01230
Biosynthesis of amino acids
Module
smw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SMWW4_v1c01910 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SMWW4_v1c01910 (dapF)
Enzymes [BR:
smw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SMWW4_v1c01910 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGE15998
LinkDB
All DBs
Position
211610..212434
Genome browser
AA seq
274 aa
AA seq
DB search
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRAAKAEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVNTAKVELLGPVLE
GHERFPERANIGFMQVVSRDHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGNPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgagctgatccgccggctggccgatcggcacctgggcgtc
ggctttgaccagatgctggtggtagaaccgccttacgatcccgaactggattttcactac
cgaatttttaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcgcgttgcttc
gcgcgcttcgtgcggctgaaagggctgaccaacaaacgcgacatccgcgtcagcacccaa
accgggcgcatggtgctcagcgtcaccgacgacgatctggtgtgcgtcaacatgggtgag
ccgaatttcgacccgcaggcggtgccgttccgcgccgccaaggctgaaaagacctacatc
atgcgcgcggcggaacataccgtgttgtgcggcgtggtgtcgatgggcaacccgcattgt
gttttgcaggtggacgacgtaaacaccgccaaggtggagctgctcgggccggtgctggaa
gggcatgaacgcttcccggaacgggccaacatcggctttatgcaggtggtcagccgcgat
catatcaagctgcgcgtttatgagcgcggcgccggtgaaacgcaggcctgcggcagcggc
gcctgtgcggcggtggcggtggggatccaacaggaattgctgtcagaagaagtgcatgta
gagctgccgggcggcagcctgcatattcgctggaaagggccgggcaacccgctgtttatg
accggtccggcaacccatgtctatgacggatttattcatctatga
DBGET
integrated database retrieval system