KEGG   Serratia marcescens WW4: SMWW4_v1c01910
Entry
SMWW4_v1c01910    CDS       T02448                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
smw  Serratia marcescens WW4
Pathway
smw00300  Lysine biosynthesis
smw00470  D-Amino acid metabolism
smw01100  Metabolic pathways
smw01110  Biosynthesis of secondary metabolites
smw01120  Microbial metabolism in diverse environments
smw01230  Biosynthesis of amino acids
Module
smw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:smw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SMWW4_v1c01910 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SMWW4_v1c01910 (dapF)
Enzymes [BR:smw01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SMWW4_v1c01910 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AGE15998
LinkDB
Position
211610..212434
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRAAKAEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVNTAKVELLGPVLE
GHERFPERANIGFMQVVSRDHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGNPLFMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgagctgatccgccggctggccgatcggcacctgggcgtc
ggctttgaccagatgctggtggtagaaccgccttacgatcccgaactggattttcactac
cgaatttttaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcgcgttgcttc
gcgcgcttcgtgcggctgaaagggctgaccaacaaacgcgacatccgcgtcagcacccaa
accgggcgcatggtgctcagcgtcaccgacgacgatctggtgtgcgtcaacatgggtgag
ccgaatttcgacccgcaggcggtgccgttccgcgccgccaaggctgaaaagacctacatc
atgcgcgcggcggaacataccgtgttgtgcggcgtggtgtcgatgggcaacccgcattgt
gttttgcaggtggacgacgtaaacaccgccaaggtggagctgctcgggccggtgctggaa
gggcatgaacgcttcccggaacgggccaacatcggctttatgcaggtggtcagccgcgat
catatcaagctgcgcgtttatgagcgcggcgccggtgaaacgcaggcctgcggcagcggc
gcctgtgcggcggtggcggtggggatccaacaggaattgctgtcagaagaagtgcatgta
gagctgccgggcggcagcctgcatattcgctggaaagggccgggcaacccgctgtttatg
accggtccggcaacccatgtctatgacggatttattcatctatga

DBGET integrated database retrieval system