Serratia marcescens WW4: SMWW4_v1c01950
Help
Entry
SMWW4_v1c01950 CDS
T02448
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smw
Serratia marcescens WW4
Pathway
smw03420
Nucleotide excision repair
smw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMWW4_v1c01950 (uvrD)
03430 Mismatch repair
SMWW4_v1c01950 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c01950 (uvrD)
Enzymes [BR:
smw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMWW4_v1c01950 (uvrD)
DNA repair and recombination proteins [BR:
smw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMWW4_v1c01950 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SMWW4_v1c01950 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AGE16002
LinkDB
All DBs
Position
214847..217009
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLEANLPQDFQILDSDDQL
RLLKRIIKALNVDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNSIQYAWIRLLAGGN
SSVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILKAANTLIANN
DGRMGKNLWTEGGEGEPISLYCAFNELDEARFVVNRIKTWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRELMQDKVLAGRAASALQRFIELVESLAHETADMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVNHRRMG
TPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctccgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggcggcg
ccgcgcagcaacctgttggttctggccggagcgggcagcggcaagacgcgggtgctggtg
catcgcatcgcctggctgctgtcggtggagaactgctcgccgtattcgattatggcggtg
accttcaccaacaaggcggcggcggaaatgcgtcaccgaatcgaacatctgatcggcacc
agccagggcggcatgtggatcggcaccttccacggcctggcgcatcgtctgttgcgcgcc
catcacctggaggccaacctgccgcaggatttccagatcctcgacagcgacgaccagctg
cggctgctcaagcgcatcatcaaggcgctgaacgtcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggcaagaaagacgagggcctgcgcccgcagcacgtcgaa
acctacaacaacccggtggaggccacctggctgcgtatctaccaggcctatcaggaagcc
tgcgatcgcgcggggctggtggatttcgccgagctgctgctgcgtgcgcacgagctgtgg
ctgaacaagccgcatatcctcaaccactaccgcgagcgtttcaccaacgtgctggtggat
gaattccaggataccaacagcatccagtacgcctggatccgcctgctggcgggcggcaac
agcagcgtgatgatcgtcggcgacgatgaccagtcaatctacggttggcgcggcgcgcag
gtggaaaacatccagcgcttcctgaaggatttccccggcgcggaaaccatccgtctggag
cagaactaccgttccaccagcaacatcctgaaagcggccaacaccctgatcgccaacaac
gacgggcgcatgggcaaaaacctgtggaccgaaggcggtgaaggcgagccgatttccctc
tactgcgccttcaacgaactcgacgaagcgcgcttcgtggtcaaccgcatcaagacctgg
caagacaacggcggcgcgctgaacgactgcgccatcctgtaccgcagcaacgcccagtcg
cgggtgctggaagaggcgctgttgcagacggcgatgccgtaccgcatctacggcggccag
cgcttcttcgaacgccaggaaatcaaggatgcgctggcttacctgcgcctcatttccaac
cgcaacgacgacgcagccttcgagcgcgtggtcaataccccgacgcgcggcatcggcgat
cgcaccctcgacgtggtgcgccaggcggcgcgcgatcgccagctgacgctgtggcaggcg
acgcgcgagctgatgcaggacaaggtgttggccggccgcgccgcgtcggcgctgcagcgt
ttcatcgaactggtggaatcgctggcgcatgaaaccgccgacatgccgctgcatgtgcag
accgaccgggtgatccgcgactccgggctgttcatcatgtatgaacaggagaagggcgag
aaggggcaggcgcgtatcgaaaacctcgaggaactggtgacggcgacgcgccagttcagc
tatcaggacgaagatcaggatctgatgccgctgcaggcgttcctgtcgcatgcggcgctg
gaagcgggcgaaggccaggccgacgcctatcaggacgcggtgcagctgatgactctgcac
tcggccaaggggctggagttcccgctggtgtttatcgtcggcatggaagagggcatgttt
ccgagccagatgtcgctggatgaaggcggccgtctggaggaggagcgccgtctggcctat
gtgggcgtaacgcgtgccatgcagaagctgacgctgacctatgccgaaacgcgccgtctg
tacggcaaagaggtttaccatcggccgtcgcgctttatcggcgaactgccggaggagtgc
gtggaagaagtgcgcctgcgcgccagcgtatcgcgcccggtcaatcaccgccgcatgggc
acgccgatcagcgagaacgataccggctataagctgggccagcgcgtgcgccatcccaag
tttggcgaaggcaccatcgtcaatctggagggcagcggcgagcacagccggctgcagatc
gccttcccgggtgaaggcatcaaatggctggtggcggcctacgcgcgtttggaaacggtc
taa
DBGET
integrated database retrieval system
