Serratia marcescens WW4: SMWW4_v1c02250
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Entry
SMWW4_v1c02250 CDS
T02448
Symbol
rpoH
Name
(GenBank) RNA polymerase, sigma 32 (sigma H) factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smw03021
]
SMWW4_v1c02250 (rpoH)
Transcription machinery [BR:
smw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMWW4_v1c02250 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AGE16032
LinkDB
All DBs
Position
246638..247495
Genome browser
AA seq
285 aa
AA seq
DB search
MTKEMQTLALVPQGSLEAYIRAANAYPMLTAEEERELAERLHYQGDLDAAKQLILSHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPDDEARDGQSMAPVLYLQDKSSDFAEGIEEDNWESNAADKLAYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLKMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagccttagtaccccaaggtagcttggaagcctatatc
cgggcagccaacgcctatccgatgctgacggcagaggaagagcgggagctggctgaacgg
ctgcattatcagggcgatctggatgccgctaagcagctcatcctgtctcacctgcgcttt
gtcgctcatattgcccgcaactattcaggctatggtctgccgcaggcggatctgattcag
gaaggcaatatcggcctgatgaaagccgttcgccgcttcaaccctgaagtcggcgtgcgt
ctggtttcctttgcggtgcattggattaaggcggaaatccacgagtacgtattgcgcaac
tggcgcatcgtgaaagtggcgaccaccaaagcgcagcgcaagctgttctttaacctgcgc
aaaaccaaacagcgtttgggctggttcaaccaggacgaagtggaactggtggcccgtgag
ctgggcgtaaccagcaaagacgtgcgcgagatggaatcgcgcatggcggcgcaggacatg
acgttcgatccgactccggacgacgaggcccgcgacggccagtcgatggcgccggtgctg
tacctgcaggacaagagctcggacttcgccgaaggcatcgaggaagataactgggaaagc
aacgccgcagacaaactggcctatgcgctggaaggtctggacgagcgcagccagcatatc
attcgcgcccgttggctggacgacgacaacaagtcgacgctgcaggagctggccgatcag
tacggcgtttccgccgaacgcgtgcgccagctggaaaagaacgccatgaagaaactgaaa
atggcgatcgaagcctga
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