Serratia marcescens WW4: SMWW4_v1c02630
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Entry
SMWW4_v1c02630 CDS
T02448
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00071
Fatty acid degradation
smw00280
Valine, leucine and isoleucine degradation
smw00310
Lysine degradation
smw00362
Benzoate degradation
smw00380
Tryptophan metabolism
smw00410
beta-Alanine metabolism
smw00640
Propanoate metabolism
smw00650
Butanoate metabolism
smw00907
Pinene, camphor and geraniol degradation
smw00930
Caprolactam degradation
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
smw01120
Microbial metabolism in diverse environments
smw01200
Carbon metabolism
smw01212
Fatty acid metabolism
Module
smw_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SMWW4_v1c02630 (fadB)
00650 Butanoate metabolism
SMWW4_v1c02630 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SMWW4_v1c02630 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SMWW4_v1c02630 (fadB)
00310 Lysine degradation
SMWW4_v1c02630 (fadB)
00380 Tryptophan metabolism
SMWW4_v1c02630 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SMWW4_v1c02630 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SMWW4_v1c02630 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SMWW4_v1c02630 (fadB)
00930 Caprolactam degradation
SMWW4_v1c02630 (fadB)
Enzymes [BR:
smw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SMWW4_v1c02630 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SMWW4_v1c02630 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SMWW4_v1c02630 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SMWW4_v1c02630 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AGE16070
LinkDB
All DBs
Position
complement(285789..287978)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNASGSVNKLDTRTVASLGEALTVLENQPELKGLLLRST
KAAFIVGADITEFLSLFAAPAEKLHEWLVFANNVFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLAEAALNMLQQAIDGKLDWRAARQPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLAKNVDAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDISDKSLTLGMREAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVEGLIGE
DTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDDTIAKVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPDRMSKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDSKGKP
RKDNDEQTDALLAEVSQPRQTISDEEIIARMMIPMINEVVRCLEENIVASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYAHLGALYQVPAGLRAKAERNESYYPVATPL
SDVATRQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgataacggcattgccgagctg
gtgttcaacgcatcaggctcggtcaacaagctggacacccgcaccgtcgccagcctgggc
gaggcgctcaccgtgctggaaaaccagcctgagctcaaggggctgctgctgcgctccacc
aaagccgcatttatcgtcggcgccgatatcaccgaattcctttctctgtttgccgcaccg
gctgaaaagctgcacgagtggctggtattcgccaacaacgtctttaaccggctggaagat
ttgccggtaccgaccatttcggccattaacggctatgcgctcggcggcggttgcgaatgc
attctggcgaccgatttccgcgtcgcctcgccggacgcgcgcatcggcctgccggaaacc
aaattgggcatcatgccgggcttcggcggttccgtccgtctgccacgcctgctaggtaac
gacagcgcgctggaaatcatcgccgccggcaaagacgtcagcgccaaagacgcgttgaaa
gtcggcctggtcgatgcggtagtggcgccggaaaaactggccgaagcggcgctcaacatg
ctgcaacaggcgatcgacggcaagctggactggcgcgccgcgcgtcaacctaagctggag
ccgctgaaactcagcccgattgaagcggcgatgagcttcaccaccgccaaaggcatggta
ctgcagaccgccggtaaacattacccggcgccgatgaccgcggtgaagaccattgaagcc
gccgccaagctgggccgcgatgaagcgctgaaactggaaaccgccagcttcgtgccgttg
gcccgctccaacgaagcgcgcgcgctggtcggcatcttccttaacgatcagttcgtgaag
ggccaggcgaaaaagctggccaagaatgtggatgcgccaaaacaggcggcggtgctgggc
gccggcatcatgggcggcggtatcgcttaccaatcggcgctgaaaggcgtaccggtgatc
atgaaggacatcagcgacaagtcgctgacgctgggcatgagagaagcggccaagctgctc
aacaagcagctggagcgcggcaagctggatggcctgaaaatggcgcaggtgctgtcgacc
attcagccgacgctggactatgccggcatcgagcgcgcgcaggtgatcgttgaggcggtc
gtcgagaatccgaaagtcaaagccgccgtgctgtcggaagtggaaggcctgatcggtgaa
gacaccgttctggcgtcgaacacctcgaccattccgattaatcacctggcaaaatcgctg
aagcgcccgcaaaacttctgcggcatgcacttctttaacccggtgcaccgcatgccgctg
gttgaaatcatccgcggcgaacagaccagcgatgataccatcgccaaagtggtggcctac
gccagccgcatgggcaaaacgccgatcgtggtgaacgattgcccgggcttcttcgtcaac
cgcgtgctgttcccgtacttcgccggcttcagcctgctgctgcgcgacggcgccgacttc
cgtcaaatcgataaagtgatggaaaaacagttcggctggccgatgggcccggcctacctg
ctcgacgtcgtgggcatcgacaccgcgcaccacgcgcaggccgtgatggccgccggtttc
ccggatcgcatgagcaaagactaccgcgacgccattgacgtgatgttcgacaaccagcgc
ttcggtcagaaaaatcaactgggcttctaccgctacagccaggacagcaaaggcaaaccg
cgcaaggacaacgatgagcagaccgatgcgctgctggccgaagtgagccaaccgcgccag
accatcagcgacgaagaaatcatcgcgcgcatgatgatcccgatgatcaacgaagtggtg
cgttgcctggaagaaaatatcgtcgccagcccggccgaagccgatatggcgttggtctac
ggcatcggtttccctccgttccacggcggcgcgttccgctacctggatacgctcggcacc
gccaactacgttgagctggcccagcgttacgcacacctcggcgccctgtaccaggtgccg
gccggtctgcgcgccaaggccgaacgcaatgaaagctactacccggtggcgacaccgctg
tccgacgtcgctacccgccaaccggcatga
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