Serratia marcescens WW4: SMWW4_v1c03500
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Entry
SMWW4_v1c03500 CDS
T02448
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smw
Serratia marcescens WW4
Pathway
smw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMWW4_v1c03500 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smw03019
]
SMWW4_v1c03500 (groEL)
03110 Chaperones and folding catalysts [BR:
smw03110
]
SMWW4_v1c03500 (groEL)
03029 Mitochondrial biogenesis [BR:
smw03029
]
SMWW4_v1c03500 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smw04147
]
SMWW4_v1c03500 (groEL)
Enzymes [BR:
smw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SMWW4_v1c03500 (groEL)
Messenger RNA biogenesis [BR:
smw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SMWW4_v1c03500 (groEL)
Chaperones and folding catalysts [BR:
smw03110
]
Heat shock proteins
HSP60 / Chaperonin
SMWW4_v1c03500 (groEL)
Mitochondrial biogenesis [BR:
smw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SMWW4_v1c03500 (groEL)
Exosome [BR:
smw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SMWW4_v1c03500 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SMWW4_v1c03500 (groEL)
Exosomal proteins of breast cancer cells
SMWW4_v1c03500 (groEL)
Exosomal proteins of colorectal cancer cells
SMWW4_v1c03500 (groEL)
Exosomal proteins of bladder cancer cells
SMWW4_v1c03500 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2712
Motif
Other DBs
NCBI-ProteinID:
AGE16157
LinkDB
All DBs
Position
404665..406311
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVVAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTIIIDGVGDEATIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVAGKIAALKGDNEDQNVGIKVALRAMEAPLRQIVVNAGEEASVIANQVKAGEGSYGYNA
YSEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKADAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggcaatgacgctcgcgtgaaaatgctccgcggcgtg
aatgttctcgctgatgcagtaaaagtgaccctgggcccgaaaggccgcaacgtagtgctg
gataaatctttcggcgcaccgaccatcaccaaagacggcgtttccgttgcgcgtgaaatc
gagctggaagacaagttcgagaacatgggcgcacagatggtgaaagaagtggcctccaaa
gcgaacgacgcggcgggcgacggcaccaccacggcaaccgtactggctcaatccatcatc
accgaaggcctgaaagcggttgctgccggcatgaacccgatggatctgaagcgcggcatc
gacaaagcggttgtcgctgcggttgaagaactgaaaaaactgtccgtaccttgctccgat
tccaaagctatcgctcaggtaggcaccatctccgccaactccgacgaaaccgtgggtaaa
ctgatcgcggaagcgatggagaaagtgggcaaagaaggcgttatcaccgttgaagaaggc
accggcctgcaagacgagctggacgtggttgaaggtatgcagttcgaccgcggttacctg
tccccatacttcatcaacaagccggaaaccggttctgttgagctggaaagcccgttcatc
ctgctggctgacaagaagatctccaacatccgcgaaatgctgccggtgctggaagccgtt
gccaaagcaggcaaaccgctgctgatcatcgctgaagacgttgaaggtgaagcgctggcg
accctggtggtcaacaccatgcgcggcatcgtgaaagtggctgccgttaaggcgcctggc
ttcggcgaccgtcgtaaagccatgctgcaggacatcgcgaccctgactgccggtaccgtt
atctctgaagagatcggtctggagctggaaaaagccaccctggaagacctgggtcaggcg
aaacgcgttgtcatcaacaaagacaccaccatcatcatcgatggcgtgggcgacgaagcg
accatccagggccgcgttgctcagatccgtcagcagatcgaagaagcgacctctgactac
gatcgtgaaaaactgcaggagcgcgtagcgaaactggccggcggcgttgccgttatcaag
gttggcgcagcgactgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgcgctgcagtggaagaaggcgtggttgccggcggcggcgtcgcgctgatc
cgcgttgcaggcaaaatcgccgcgctgaaaggcgacaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaagcccctctgcgtcagatcgtggttaacgccggtgaa
gaagcttccgttatcgccaaccaggtgaaagcgggcgaaggcagctacggctacaacgct
tactctgaagaatacggcgacatgatcgcgatgggtatcctggatccaaccaaagtgacc
cgttctgctctgcagtacgcggcttccgtggctggcctgatgatcaccaccgaatgcatg
gtcaccgacctgccgaaggctgacgcaccggatctgggcgcagcaggcggcatgggcggc
atgggcggtatgggcggcatgatgtaa
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