Serratia marcescens WW4: SMWW4_v1c04210
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Entry
SMWW4_v1c04210 CDS
T02448
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
smw
Serratia marcescens WW4
Pathway
smw00550
Peptidoglycan biosynthesis
smw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMWW4_v1c04210 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smw01002
]
SMWW4_v1c04210 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
SMWW4_v1c04210 (dacB)
Enzymes [BR:
smw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SMWW4_v1c04210 (dacB)
Peptidases and inhibitors [BR:
smw01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
SMWW4_v1c04210 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SMWW4_v1c04210 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AGE16228
LinkDB
All DBs
Position
complement(477418..478851)
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AA seq
477 aa
AA seq
DB search
MRFSRIVSALACAFVLNANAAPVEEYTQYLPDGANLALVVQKIGAGAPTIDYHSQQMALP
ASTQKVLTALAALLQLGPDYRFTTTLESQGDIRDGVLRGNLIARFSGDPTFKRQSLRNMV
AVLKKQGVRQISGDVLVDTSVFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYS
APNPGDMAFIRVASYYPVNMFSQVRTLARGSADAQYCELDVVPGELNRFTLTGCLTQRSE
PLPLAFAIQDGASYAGAILKDELKQADIQIDGHLKRQTRPGITGTVIAQTQSAPLHDLLK
IMLKKSDNMIADTVFRTIGHERFGVPGTWRAGSDAVRQVLRQKAGIDLGNTIIADGSGLS
RHNLLAPATMMQALQYIAQHDNELNFISMLPLSGYDGTLRYRGGLHEAGVDGKVSAKTGA
LQGVYNLAGFITTASGQRMAFVQYLSGYAVPPEDQKQRRAPLVRFESRLYRDIYQNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttcacgaattgtcagtgcattggcttgcgcatttgttctgaatgcgaatgcg
gccccggttgaagagtacacacaatatctgcctgatggggccaaccttgccctggtcgtt
cagaagatcggcgccggtgcgccgacgatcgattaccactctcagcaaatggcgctgccg
gccagtacccaaaaagtgctgacggcgctggcggcattgctgcaactcgggcccgattac
cgtttcaccaccacgctggagagccagggtgatatccgcgacggcgtgctgcgcggcaac
ctgatcgcccgcttcagcggcgatccgaccttcaaacgccagagcctgcgcaatatggtg
gccgtcctgaagaagcagggcgtgcgccaaatcagcggcgacgtgctggtcgatacctcg
gtcttcgccagccatgacaaggcgcccggctggccgtggaacgatctgacgcagtgcttc
agcgcgccgccggccgccgccattgtcgatcgcaactgtttctcggtctcgctgtacagc
gcgccgaatccgggcgacatggcgtttatccgcgtcgcctcctattatccggttaatatg
tttagccaggtgcgcaccctggcgcgcggctccgcagacgcgcagtactgcgagctggat
gtggtgccgggcgagctgaaccgctttaccctgaccggctgcctgacgcagcgcagcgag
ccgttgccgctggccttcgccatccaggacggcgccagctatgcgggcgccatcctgaaa
gacgagctgaagcaggccgacatccagatcgacgggcatttgaaacgccagacgcgcccc
ggcatcaccggcacggtgatcgcgcaaacccagtcggcgccgctgcacgatctgttgaaa
atcatgctgaagaaatcggacaacatgatcgccgataccgtcttccgcaccatcggccac
gaacgcttcggcgtgccgggcacctggcgagccggttccgatgcggtacggcaggtgctg
cgccagaaggccggcatcgatctgggcaacaccatcatcgccgacggttccggcctgtcg
cgccacaacctgctggccccggcgaccatgatgcaggcgctgcagtacatcgcgcagcac
gacaacgagctgaactttatctcgatgctgccgctgtccggctatgatggcaccctgcgc
taccgcggcggcctgcatgaggctggcgtagacggcaaggtgtcggccaagaccggcgcg
ctgcagggcgtctacaacctggcgggcttcatcactaccgccagcggccagcgcatggcc
ttcgtgcagtatctctccggctacgccgtgccgccggaagatcagaaacagcgccgcgca
ccgctggtgcgtttcgaaagccgcctgtatcgggatatttaccaaaacaactga
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