Serratia marcescens WW4: SMWW4_v1c04710
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Entry
SMWW4_v1c04710 CDS
T02448
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00230
Purine metabolism
smw00240
Pyrimidine metabolism
smw01100
Metabolic pathways
smw01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SMWW4_v1c04710 (nrdD)
00240 Pyrimidine metabolism
SMWW4_v1c04710 (nrdD)
Enzymes [BR:
smw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
SMWW4_v1c04710 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
PSV_ORF131-like_dom
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AGE16278
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Position
complement(527574..529712)
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AA seq
712 aa
AA seq
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MKPVVIKRDGCQVPFDEARIAQAIERAALAVGVVDADYCATVARVVAQRMEQQPRVDIHE
IQQAVENQLMAGEYKQLARAYIEYRHDRDVARELRGRLNQEIRGLVEQSNRALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQHILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDL
KGMLTNGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVDESF
RKHLQVAEEWQIPDAKGYAMARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WESRLIQRSILKNRIAGLGKNRKTAVFPKLVFAIRDGLNHQYGDPNYDIKQLALECASKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGTYEQDGELVHDGRNNIGVISLNLPRIALEAM
GDESRFWTLLDQRLQLAKKALMTRIARLEGIKARVAPILYMEGACGVRLKADDNIADIFK
NGRASISLGYIGLHETINALFGGENHVYDDEALRAKAVAIVARLRAAVDAWKDETGYGFS
LYSTPSENLCDRFCRLDTADFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPL
ASGGFICYGEYPNLQHNLKALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFSCTSKGF
TCPKCGNHDSAKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccagtagtgattaagcgggacggttgccaggtaccttttgacgaagcgcgcatt
gcgcaggccatcgagcgcgccgcgctggcggtgggcgtggtcgacgccgactactgcgcc
accgtcgcccgcgtggtcgctcagcgcatggagcagcagccgcgcgtcgatatccacgag
atccagcaggcggtggaaaaccagctgatggccggcgaatacaaacagctggcgcgcgcc
tatatcgaataccgccacgatcgcgacgtggcgcgcgagctgcgcggccgcctgaaccag
gaaattcgcggcctggtcgagcagagcaaccgcgcgctgctgaacgaaaacgccaataag
gacagcaaggtgatccccacccagcgcgacctgctggcgggcatcgtcgccaaacactac
gccaagcaacacatcctgccgcgcgacgtggtgctggcccatgaacgcggcgaaattcac
taccacgatctcgactactcgccgttcttcccgatgttcaactgcatgctgatcgatctg
aaaggcatgctgaccaacggtttcaagatgggcaacgccgagattgagccgccgaagtcg
atctccaccgccaccgccgtgaccgcgcagatcatcgcccaggtcgccagccatatctat
ggcggcaccaccatcaaccgcatcgatgaaattctggcgccgttcgtcgacgagagcttc
cgcaaacacctgcaggtggcggaagaatggcagatcccggacgccaaaggctatgccatg
gcgcgcaccgagaaagagtgttacgacgccttccagtcgctggagtacgaggttaacacc
ctgcacaccgccaacggccagacgccgttcgtcaccttcggtttcggcctcggcaccagc
tgggagtcgcgcctgatccagcgctcgatattgaaaaaccgcatcgccgggctgggtaaa
aaccgcaagaccgccgtgttccccaaactggtgttcgccatccgcgacggcctcaaccac
cagtacggcgatccgaactacgacatcaagcagctggcgctggagtgcgccagcaagcgc
atgtacccggacatcctcaactacgatcaggtggtgaaggtcaccggctcgttcaaaacg
ccgatgggctgccgcagcttcctcggcacctacgagcaggacggcgaactggtgcacgac
ggtcgcaacaacatcggcgtcatcagcctcaacctgccgcgcatcgcgctggaggcgatg
ggcgatgagtcgcgcttctggacgctgctggatcagcgcctgcagctggcgaaaaaggcg
ctgatgacgcgcatcgcccggctggaaggcatcaaggcgcgggtggcgccaatcttgtac
atggaaggcgcctgcggcgtgcggctcaaggccgatgacaatatcgccgatatcttcaag
aatggccgcgcttcaatttcgctgggctacatcggcctgcacgagaccatcaacgcgctg
ttcggcggcgaaaaccacgtgtatgacgacgaagcgctgcgcgccaaagcggtggcgatc
gtcgcgcggctgcgcgccgccgtcgacgcctggaaagacgagaccggctacggcttcagc
ctctacagtacgccgagcgagaacctgtgcgatcgcttctgccggctggacaccgccgat
ttcggcgtggtgccgggcgtcaccgacaagggctattacaccaacagcttccacctcgac
gtggagaagaaggtcaatccgtacgacaagctggacttcgaagcgccctacccgccgttg
gccagcggcggcttcatctgctacggcgaatacccgaacctgcagcacaacctgaaggcg
ctggaagacgtgtgggactacagctacagccgggtgccttactacggcaccaacacgccg
atcgacgagtgctacgaatgcggcttcaccggtgaattctcctgcaccagcaaaggcttc
acctgcccgaaatgcggcaatcacgactcggccaaggtctcggtcacccgccgggtgtgc
ggctatctcggcagccccgatgcccggccgttcaacgccggcaagcaggaagaggtgaaa
cgccgggtgaaacacctcggcaacgggcagctcggctga
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