Serratia marcescens WW4: SMWW4_v1c04760
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Entry
SMWW4_v1c04760 CDS
T02448
Symbol
treR
Name
(GenBank) DNA-binding transcriptional repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c04760 (treR)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SMWW4_v1c04760 (treR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_31
HTH_IclR
HTH_23
Peripla_BP_4
HTH_7
MarR_2
HTH_Tnp_ISL3
MarR
HTH_AraC
SpoIIID
HTH_Crp_2
AAA_18
Xre-like-HTH
CENP-B_N
HHH
TrmB
Motif
Other DBs
NCBI-ProteinID:
AGE16283
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All DBs
Position
complement(534815..535762)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLLYQQGFDPIVMESQFETRLVQEHLHVLRQRNVD
GVILFGFTGLTAAMLKPWQEKMVVMVREYDGFSSVCYDDAGAVNLLMDRLYRQGHRHIGY
LGVQLSDATTGQRRYQAYLDACERLTLTPRATLGELSYQSGFQHAAEVIDAHTSALICAS
DSIALGAIKYLQQQPARAIQVCAIGNTPLLSFLFPDTLSVEFGYGSAGLLAAQQLLAQLS
GEQGIRRLVVPSKLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaggacatcgcgcgcctgagcggcgtaggcaaatccacc
gtctcacgcgtgttgaacaatgaaggcagcgtgagcccgcaaacccgcgaacgggtggaa
gcggtgatccgtcagcaagggtttaccccctccaagtcggcgcgcgccatgcgcggccaa
agcgacaaagtggtgggcatcatcgtttcccgtctcgattcgccgtcggagaaccaggcg
gtgcgcaccatgctgccgctgctgtaccaacagggcttcgacccgatcgtgatggagagc
cagttcgaaacccgcctggtgcaggagcacctgcacgtactgcgccagcgcaacgtcgac
ggcgtgatcctgttcggcttcaccggcctgaccgcggcgatgctcaagccgtggcaggaa
aaaatggtggtgatggtgcgcgaatacgacggcttctcgtccgtctgctacgacgacgcc
ggcgcggtgaacctgttgatggatcgtctgtaccggcaggggcatcggcatatcggctat
ctgggggtgcagctcagcgacgccaccaccggccagcgccgctaccaggcctatctcgac
gcctgtgaacgcctcacgctcacgccgcgcgccacgctgggcgagctgagttaccagagc
ggtttccagcacgccgccgaagtgatcgatgcgcacaccagcgcgctgatctgcgcctcc
gacagcatcgccctcggcgcgatcaagtacctgcagcagcagccggcgcgcgccattcag
gtgtgcgccatcggcaacaccccgctgctcagcttcctgttccccgacactctgtcggtg
gagttcggctacggcagcgccggcctgctggcggcgcagcagctgctggcgcagctcagc
ggcgaacaggggatccgccgcctggtggtgcccagcaaactttcctga
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