Serratia marcescens WW4: SMWW4_v1c05120
Help
Entry
SMWW4_v1c05120 CDS
T02448
Name
(GenBank) LacI family transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c05120
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SMWW4_v1c05120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_IclR
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AGE16319
LinkDB
All DBs
Position
585699..586718
Genome browser
AA seq
339 aa
AA seq
DB search
MATILEVAKKAGVSKATVSRVLSGSGYVSEEKRALVDKAIAETGYRPNLLARSLATNTTQ
TLGLVVTNTLYSGNYFSELMAQSARIMEANGRQLILADGKHTAEEERAAIQFLLDLRCDG
VIIYPRFLSIAEMDEIVSQHRQPILVINRRLRLNDSYCIFSDQHAAGAAAVAHLIARGHR
DIAFITGSLDSPTGLERLSGYKSALAQQGIAVNEALIVEGKWNAQSGVAAVDALLAGGQP
VSAIGAGNDEMAIGAMKRLAERGVAVPEAVSVIGFDDIPLAPYTVPSLSSMKMPVTEMIQ
ETINRLLSMLDGGELSKRPSFPASLIERESVAAGPYERD
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatactcgaggtggcgaaaaaggccggcgtttcaaaggcgacggtgtcgcgc
gttttgtccggcagcggctatgtcagcgaggagaaacgcgcgttggtggataaagccatc
gcggaaaccggctatcggcccaacctgctggcgcgcagcctggcgaccaacaccacccaa
accctcggcctggtggtcaccaacaccctctacagcggcaactatttcagcgaactgatg
gcgcagtcggcgcgcatcatggaggcgaacggccgccaactgatcctggcggacggcaag
cacaccgccgaagaggagcgggccgccattcagtttttgctggatctgcgctgcgacggg
gtgatcatctacccgcgttttctgtcgatcgcggaaatggacgagattgtctcccaacac
cgtcagccgattctggtgatcaaccggcggctgcggctgaacgacagctactgtatcttc
agcgatcagcacgccgccggcgcggcggcggtggcgcacctgatcgcgcgcgggcatcgc
gatatcgcctttatcaccggctcgctcgattcccccaccgggctggagcggctttccggc
tacaaatccgcgctggcgcagcagggcattgcggttaacgaggcgttgatcgtcgaagga
aaatggaacgcgcaaagcggcgtggcggcggtcgatgcgctgctggccggcgggcagccg
gtcagcgccatcggcgccggcaacgacgaaatggccatcggcgcgatgaagcggctggcg
gagcgtggcgtggcggtgccggaggcagtatcggtcatcggcttcgacgacatcccattg
gcgccttatactgtgccgtcgctgtcgagcatgaagatgccggtcaccgagatgatccag
gagaccatcaaccgcctgctgtcgatgctggacggcggcgagctcagcaagcgccccagc
ttcccggccagcctgatcgagcgcgagtcggtggcggcggggccgtacgagcgggattga
DBGET
integrated database retrieval system
