Serratia marcescens WW4: SMWW4_v1c05560
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Entry
SMWW4_v1c05560 CDS
T02448
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c05560
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SMWW4_v1c05560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_11
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AGE16363
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Position
630743..631672
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AA seq
309 aa
AA seq
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MQVKKRALLGQLSDMDLRLLRVFKAVVDCGGMSAAELELNISLSTISKHIKDLEQRLGLT
LCQRGREGFAVTDEGLIIYQETVNLLAATEAFRRGVDEVHQRMGGQLHVAIFDHTVSNPQ
AQIGRAIALFSERAPEVSLQMYVEPINTIERGVIDGQFQVGVIPMHRSAESLSYHSLFSE
RMFLYCGAQHELFSGPHETLNWDLLHNYAFAGLGYHSPNMELSLQQHLHRKATGFAQESI
ATLILSGKYVGFLPDHYAAFFVAQNLMRAIKPALFRYHCEYSSVLRRSPVPQRVVKLFHE
CLLAAHGTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaaaagcgcgcgttgctgggacaattgtcggatatggatctgcgtttgctg
cgggtattcaaggccgtggtcgactgcggcggcatgagcgccgccgaactggagctgaac
atcagcctgtcgaccatcagcaagcacatcaaggatctggagcagcggctgggcctgacg
ctgtgccagcgcgggcgcgagggctttgcggtcaccgacgaggggctgattatctaccag
gaaaccgtcaacctgctggcggccaccgaggccttccgtcgcggagtggacgaggtgcac
cagcgcatgggcgggcagctgcacgtggcgatattcgaccatacggtcagcaatccgcag
gcgcagatcggccgggccatcgcgttattcagcgagcgcgcgccggaggtttctttgcaa
atgtatgtggagccgattaataccattgaacgcggcgttattgacgggcaatttcaggtt
ggggttattcccatgcaccgcagcgcggaaagtttatcttatcattcgttattcagtgag
aggatgttcttatattgcggcgcgcagcatgaattattttccggcccccatgaaacatta
aattgggatctgctgcacaattatgccttcgccggattaggctatcattcgccgaatatg
gaactgagcctgcagcaacatttgcatcgcaaggcgacggggtttgcgcaggagtcgata
gcgacgttaattctgtccggcaaatacgtcggctttctgccggatcactacgcggcgttt
tttgtggcgcagaacctgatgcgggcgatcaaaccggcgctgttccgctatcactgcgaa
tactccagcgtgctgcgccgctcgccggtgccgcagcgggtggtgaagctgttccatgag
tgcctgctggcggcccacggaacagcgtga
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