Serratia marcescens WW4: SMWW4_v1c07000
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Entry
SMWW4_v1c07000 CDS
T02448
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00220
Arginine biosynthesis
smw00240
Pyrimidine metabolism
smw00250
Alanine, aspartate and glutamate metabolism
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
smw01240
Biosynthesis of cofactors
Module
smw_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SMWW4_v1c07000 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SMWW4_v1c07000 (carB)
00220 Arginine biosynthesis
SMWW4_v1c07000 (carB)
Enzymes [BR:
smw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SMWW4_v1c07000 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
AGE16507
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All DBs
Position
778372..781596
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGSDRIWYIADAFRAGLSVDGVFNLTNVDRWFLVQIEELVRLEEQVADAG
INGLNQEFLRTLKRKGFADARLAKLAGVAESEIRKLRHSYGLHPVYKRVDTCAAEFATDT
AYMYSTYEEECESNPTNDRPKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVP
IIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVTAIEQAVEKAAGIGYPLVVRPSYVL
GGRAMEIVYDETDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRRQVEKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEIIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSNSGMKKQGRALLSVREGDKARVVDL
AASLLKQGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALKADPTEQVTSVQEMHARIGK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagcatcctgatcctcggcgctggcccgatcgttatc
ggccaggcgtgtgagttcgactactcgggtgcccaggcgtgtaaagcgctgcgcgaggag
ggttaccgcgtcattctggtcaactccaacccggcgaccatcatgaccgacccggaaatg
gccgatgcgacctacattgagccgatccactgggaagtggtgcgcaagatcatcgaaaaa
gagcgcccggatgcggtgctgccgaccatgggcggccagacggcgctgaactgcgcgctg
gaactggagcgtcagggcgtgctggccgagttcggcgttaccatgatcggcgccaccgcc
gatgcgattgacaaggccgaagaccgtcgccgtttcgacgtggcgatgaagaaaatcggt
ctggataccgcgcgttccggcatcgcgcacaccatggaagaagcgctggcggtggccgct
gacgtcggcttcccgtgcatcatccgtccttcctttaccatgggcggcaccggcggcggc
atcgcctacaaccgcgaagagttcgaagagatctgcgaacgcggtctggatctgtcgccg
accaacgagctgctgatcgacgaatcgctgatcggttggaaagagtacgagatggaagtg
gtgcgtgataagaacgacaactgcatcatcgtctgctccatcgaaaacttcgacgccatg
ggcatccacaccggcgactcgatcaccgtcgcgccggcccagaccctgaccgacaaggaa
taccaaatcatgcgcaacgcctcgatggcggtgctgcgtgagatcggcgtcgaaaccggc
ggctccaacgtgcagttctcggtcaacccgaaaaccggccgcctgatcgttatcgaaatg
aatccgcgcgtgtcgcgctcttcggcgctggcgtcgaaagccaccggcttcccgatcgcc
aagattgccgccaagctggcggtgggctacaccctcgatgagctgatgaacgacatcacc
ggcggccgcaccccggcgtcgttcgagccgtccatcgactacgtcgtgaccaagatcccg
cgcttcaacttcgagaagttcgccggcgccaacgatcgcctgactacccagatgaagtcg
gtcggtgaagtgatggccatcggccgcacccagcaggagtcgctgcagaaagcgctgcgc
ggcctggaagtgggcgccaccggtttcgacccgaaagtgagcctggacgatccggaagcg
ctgaccaaaatccgccgcgagctgaaagacgccggttccgaccgcatctggtacatcgcc
gacgccttccgcgccggtttgtcggtagacggcgtgttcaacctgaccaacgtcgaccgc
tggttcctggtgcagattgaagagctggtgcgcctggaagagcaggtggccgacgcgggc
atcaacggcctgaaccaagagttcctgcgcaccctgaagcgcaaaggcttcgccgatgcg
cgtctggccaagctggccggcgtcgccgagagcgaaattcgcaagctgcgccacagctac
ggcctgcatccggtctacaagcgcgtggatacctgcgcggcggaattcgccaccgacacc
gcctacatgtactccacctatgaagaagagtgcgaatccaacccgaccaacgaccggccg
aaagtgatggtgctgggcggcgggccgaaccgtatcggccagggcatcgagttcgactac
tgctgcgtgcacgcctcgctggcgctgcgcgaagacggctacgagaccatcatggtcaac
tgtaacccggaaaccgtctccaccgactacgacacctcagaccgcctgtactttgagccg
gtgaccctggaagacgtgctggaaatcgtgcgcatcgagaaaccgaagggcgttatcgtg
cagtacggcggccagaccccgctgaagctggcgcgcgagctggaagccgcaggcgtgccg
atcatcggcaccagcccggacgccatcgaccgcgccgaagaccgcgaacgcttccagcag
gcggtcaaccgcctgggcctgaagcagccggccaacgccaccgtcaccgccatcgaacag
gcggtggagaaggcggcgggcatcggttatccgctggtggtgcgtccttcctacgtgctg
ggtggccgggcgatggaaatcgtctatgacgaaaccgacctgcgccgctacttccagacc
gcggtcagcgtgtccaacgatgcgccggtgttgctggaccgcttcctggacgatgcggtg
gaagtggacgtcgatgctatctgcgacggcgagcgcgtgctgattggcggcatcatggag
cacatcgagcaggcgggcgtgcactccggcgactccgcgtgttcgctgccggcgtacacc
ctgagccaggaaattcaggacgtgatgcgtcgtcaggtggaaaaactggcgttcgagctg
caggtgcgcggcctgatgaacgtgcagttcgcggtgaaagacaacgaagtctacctgatt
gaagtcaacccgcgcgccgcgcgcaccgtgccgttcgtctccaaagcgaccggcgtgccg
ctggccaaagtggccgcgcgcgtgatggcgggcaaaacgctggccgagcagggcgtgacc
gaagagatcatcccgccgtactattcggtgaaagaagtggtgctgccgttcaacaaattc
ccgggcgtcgacccgattctggggccggaaatgcgctctaccggggaagtgatgggcgtg
ggccgcaccttcgcagaagccttctccaaagcgatgctgggcagcaactcgggcatgaag
aagcagggccgcgcgctgctgtcggtgcgtgaaggcgataaagcccgcgtggtcgatttg
gccgccagcctgctgaagcagggcttcgagctggacgccacccacggcaccgcagtggta
ctgggcgaagcgggcatcaacccacgcctggtcaacaaggtgcacgaagggcgtccgcac
attcaggaccgtatcaagaacggcgagtacacctacatcgtcaacaccacggcaggccgt
caggcgattgaggactccaagctgattcgccgcagcgccctgcagtacaaggtgcactac
gacaccacgctgaacggcggcttcgccaccgcgatggcgctgaaagcggatccgaccgag
caggtgacgtcggtgcaggaaatgcacgcgcgcatcggcaagtaa
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