Serratia marcescens WW4: SMWW4_v1c08070
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Entry
SMWW4_v1c08070 CDS
T02448
Symbol
truD
Name
(GenBank) tRNA(Glu) U13 pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smw03016
]
SMWW4_v1c08070 (truD)
Enzymes [BR:
smw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SMWW4_v1c08070 (truD)
Transfer RNA biogenesis [BR:
smw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMWW4_v1c08070 (truD)
Prokaryotic type
SMWW4_v1c08070 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGE16614
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All DBs
Position
906697..907743
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AA seq
348 aa
AA seq
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MDMANLTWLHGRPQSSGVLKANPEDFVVVEDLGFAPDGEGEHVLVNIRKNGCNTQFVADY
LARFAGIHARSVSYAGLKDRHAVTEQWFCLHMPGKDTPDFSRFTLEGCEVLSFARHLRKM
RIGNLKGNHFTLVLRQISDRQDVERRLQAIAAQGVPNYFGSQRFGRGGNNLVMARRWAND
EIRVKERSKRSFYLSASRSALFNLIASQRLADGLQRTVLEGDALQLSGRGSWFVAKADEL
ETLQQRLDAGELAITAPLPGDGEPGTAGQALAFEQQCLAEQPELLTLLKRERIEPARRAL
LLQPQNLQWNWWDDVTVELRFWLPAGSFATSVVREIMQQDNSDADIAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcgaatctgacctggctgcatggccggccgcagagttccggggtgttgaaa
gccaatccggaagatttcgtggtggtcgaagatctgggctttgcgccggacggtgaaggt
gagcacgtgctggtaaatatccgtaaaaacggctgcaatacccagttcgtggccgactat
ctggcgcgcttcgccggtattcacgcccgttccgtcagctatgccggtttgaaggatcgc
cacgcggtgaccgaacagtggttctgcctgcatatgccgggtaaggacacgccggatttc
tcccggtttacgctggaaggctgcgaggtgctctcgttcgcccgccacctgcgcaaaatg
cgcatcggcaatctgaagggcaaccactttacgctggtgctgcgccagatttccgatcgg
caggacgtggaacgtcgcctgcaggccatcgccgcgcagggcgtgccaaactatttcggc
agccaacgcttcggccgcggcggcaacaacctggtgatggcgcgccgctgggcgaacgac
gaaattcgtgtcaaagagcgcagtaagcgcagcttctacctgtccgccagccgcagcgcg
ctgttcaatctgatcgcgagccaacgcctggctgacgggctgcagcgcaccgtgctggaa
ggggatgccctgcagctgagtgggcgcggcagctggttcgtcgccaaagccgatgagctg
gagacgttgcagcaacggctggatgccggcgagctggcgatcacggctcccttgccgggc
gacggtgagccaggcaccgccggccaagccttggcttttgaacaacaatgcttggcggaa
caaccggaattgcttacgcttttaaagcgcgagcgtatcgaacccgctcgccgggccctg
ctgttgcagccgcaaaatttgcagtggaactggtgggatgacgttaccgtggaactgcgc
ttctggctgccggcgggcagctttgctaccagcgtggttcgcgagatcatgcagcaggat
aacagtgatgcggatattgctgagtaa
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