Serratia marcescens WW4: SMWW4_v1c08510
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Entry
SMWW4_v1c08510 CDS
T02448
Symbol
clpB
Name
(GenBank) protein disaggregation chaperone
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smw03110
]
SMWW4_v1c08510 (clpB)
Chaperones and folding catalysts [BR:
smw03110
]
Heat shock proteins
HSP100
SMWW4_v1c08510 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
TniB
nSTAND3
ATPase_2
bpMoxR
IstB_IS21
AAA_14
NBD_SMAX1
AAA_18
AAA_7
AAA_24
AAA_23
DUF815
NACHT
AAA_19
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AGE16656
LinkDB
All DBs
Position
950630..953203
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AA seq
857 aa
AA seq
DB search
MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGTVRPLLTSAGIDAGRV
RTEIEQALSRLPQVEGTGGDVQPSHELVRVLNLCDKLAQKRADKFISSELFVLAVLEDRG
SLTDLLKAAGATADKISKAIEQMRGGDSVEDQGAEDQRQALKKYTIDLTERAEQGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSL
DMGALIAGAKYRGEFEERLKGVLNDLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELH
HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRII
QLKLEQQALNKESDDASKKRLEMLSDELGQKEREYSELEEEWKAEKASLSGTQNIKAELE
QAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATQAEGKSMKLLRNRVTDAEIAEVL
ARATGIPVARMLEGERDKLLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGS
FLFLGPTGVGKTELCKALASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQEHFGQMNYAQMKESVMEMVSHHFRPEFINRIDEVVVFHPLGEKHIAAIAKIQLS
RLYKRLEERGYEVTMTEPALALLSKTGYDPVYGARPLKRAIQQEIENPLAQQILSGKLIP
GKLVTLDVENDHIVARQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggatcgtcttactaacaaattccagcttgccctcgccgatgcccagtcacta
gcccttgggcacgacaaccagtttattgaaccgctacatctgatgagcgccctgctcaat
caggaagggggcacggttcgtccactattaacttccgcaggtatcgatgccgggcgcgtg
cgcaccgaaatcgaacaggcgctgtcccgtttaccgcaggtagaaggcaccggtggcgac
gttcaaccgtcccacgagctggtgcgcgtcctgaacctgtgcgacaagctggcgcagaag
cgcgcggataaattcatttcttccgagctgtttgtgcttgcggtgctggaagaccgcggc
tcgttgaccgacttgttgaaagcggccggcgcaacggccgacaaaatcagcaaagccatt
gaacaaatgagaggcggtgacagcgtggaagaccaaggcgccgaagaccaacggcaagca
ttgaagaaatataccatcgatctgaccgaacgtgccgagcagggcaaacttgacccggtg
attggccgtgacgaagagatccgccgcaccattcaggtgctgcaacgccgcaccaaaaac
aacccggtacttatcggcgaacctggcgtgggtaaaaccgctatcgtcgaaggcctggcg
cagcgcatcatcaacggcgaagtgccggaagggttgaagcacaagcgcgtattgtccctc
gatatgggcgctttgatcgccggcgccaaatatcgcggcgagtttgaagagcgtctgaaa
ggcgtgctcaacgatctggccaagcaggaaggcagcgtgatcctgtttatcgacgaactg
cacaccatggtcggcgccggtaaggcggatggcgcaatggatgcgggcaacatgctcaaa
ccggcgctggcgcgcggcgagctgcactgcgtcggtgccaccacgctggatgagtatcgt
caatatatagagaaggatgcggccctcgaacgtcgtttccagaaagtgtatgtggcggag
ccgagcgtggaagacactatcgctattctgcgcggcctgaaagagcgttacgaactgcac
caccacgtgcagatcaccgatccggccatcgtggcggcggcaacgctttcgcaccgttat
atcgccgatcgtcaattgccggacaaggctattgacctgatcgacgaagcggcgtccagc
attcgcatgcagatggactccaagcctgaatcgctcgacaggcttgagcgccgcatcatt
cagttgaagctggaacagcaggcgctgaataaagagtcggacgacgccagtaagaaacgc
ctggaaatgctcagcgatgagctggggcagaaagaacgcgaatattcggagctggaagaa
gagtggaaagcggaaaaagcgtcactctccggtactcagaacatcaaggcggaactcgag
caggccaaaatcaccctggagcaggcgcgccgcgtcggcgatttggggcggatgtcggaa
ctgcagtacggcaagatccctgagctggagaaacagctcgccgctgccacgcaggccgaa
ggcaagagcatgaagctgctgcgcaaccgggtaaccgatgcggagattgccgaagtgctg
gcgcgcgcgaccgggatcccggtggccagaatgctggaaggcgagcgcgacaagctgctg
cgcctggagcaagagctgcattcgcgggtgatcggccaggacgaagcggtcagcgcggtc
tctaatgctatccgccgcagccgcgccgggttgtccgatcctaaccggccgatcggttcg
ttcctgttccttggcccgaccggggtggggaaaaccgagctttgcaaggcgctggcttcg
ttcctgttcgacagcgacgacgccatggtgcgtatcgacatgtccgagtttatggagaaa
cactccgtttctcgtctggtcggcgcgcctccgggctatgtcggttatgaagagggcggc
tacctgacggaagccgtacgtcgtcggccttattcggtgatcctgctggatgaagtcgag
aaagcgcacccagacgtgtttaacatcctgctgcaggtgttggatgacggccgcctgacc
gatggccagggccgtaccgtcgatttccgcaataccgtggtgatcatgacgtccaacctg
ggttcggatctgatccaggagcatttcggtcagatgaactacgcgcagatgaaagagtcg
gtgatggagatggtgagtcaccacttccgtccggaattcatcaaccgtatcgatgaagtg
gtggtgttccatccgctgggcgagaaacacattgctgcgatcgccaagattcagctgtcg
cgtctgtacaagcgtttggaagagcgcggttacgaagtaaccatgaccgagcctgctctg
gcattgttgagcaaaaccggttacgaccctgtgtatggtgcgcgtccgttgaaacgcgct
attcagcaggagatcgagaacccgttggcgcagcaaatcctgtccggcaagctgatcccc
ggcaagctggtgacgctggatgtggaaaacgaccatatcgttgcacgccaataa
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