Serratia marcescens WW4: SMWW4_v1c09950
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Entry
SMWW4_v1c09950 CDS
T02448
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c09950 (sbcC)
DNA repair and recombination proteins [BR:
smw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SMWW4_v1c09950 (sbcC)
Archaeal homologous recombinant proteins
SMWW4_v1c09950 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
nSTAND3
AAA_15
TsaE
NTPase_1
AAA_22
GTP_EFTU
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGE16799
LinkDB
All DBs
Position
complement(1102689..1105940)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGIGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLELTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDALHQRASGIELLNDEQRQSLTEQLAALSAQEIALGEQIQR
QQQALSWLQQWQRLRQQQSEGQLRLDTAQREQEEAAPQLQRLALSEPAEKLRPLRGERDR
CRAELQTIQQQAAQLTQQQEQQSAQLTPLQQAVEKTRQAQQAHAEHMRQQQQLIDEQVAP
LDHQIAQLQSTQAERRQAGDAAAQQCAQQQTALEQLTAQRSQLTRQAAQFQQQLNTLTEA
LVVQQQQQQALEAQTPLAPLRQRLSVLADLRPTRQQLFTLASLSQQIVKRLEQQRQELNS
GQHELTQLEPQLELIRQRFKQQKAHQADVEKTYALEQRIVGLEAERARLQPGAPCPLCGS
CEHPAVEQYQEVKLSETAQRLEQMKVQTEALQKQGVELRARYDNLQQQLQRQQQTIAQDE
QQLAGQQQQWRQLSAPLAFDFTLADGEQLSAWLNGCDDEERRGQQALQQHEQAAQAVQQA
KDALIDLQTQQQQTQQQLALLEERFTLLQKAHADSLQQQQELQQRWQEGEKTLAERRAQR
LTLFGEQQVAEVREQLRAKQTACEQASLQAAEQWQKAQELRERLAGQQSGLQQQHTQMQE
RLQQAQQQWQQALADSEFADETAFAAALLDDVLRRELQQRKEQLQQRQVEATALLTQATQ
TLEQHRQNRPEGLDEANADLDALTQSLAELAQQLKTLQLRQGELRNQLASDAERRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANLQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcggttaaaaaacctcaactcgctgcagggcgaatggaaaatt
gacttcaccgccgagccgttcgccagcaacggtctgttcgccattaccggcccgaccggc
gcgggcaaaaccaccctgctggacgccatttgcctggcgctgtaccaccagacgccgcgt
ctcaacgtcacgccaagccagaatgaactgatgacccgccacaccgccgaatcgctggcg
gaggtcgagttcgaggtcaagggcatcggctatcgcgccttctggagccagcgccgcgcc
aaaaacgcgccggacggcaatctgcaggcgccgaaggtcgaactggcacgccgcgaagac
ggcaagatcctggcggacaaggtgcgcgacaagctggagcttaccgccgccatcaccggg
ctggactttggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgccttc
ctcaacgccgacgccaacgatcgcgccgagctgctggaagagctgaccggcaccgaaatc
tacgggcggttgtccgaacaggtgttcgagtcgcacaagcaggccaaaaccgacctggat
gcgttgcaccaacgcgccagcggcatcgaactgctgaacgacgagcagcgccagtctctg
accgaacagctggcggcgctgagcgcgcaggaaatcgctctcggcgaacaaatccagcgc
cagcaacaggcgctgagctggctgcagcaatggcaacgcctccggcaacagcaaagcgag
gggcaattgcggctggacaccgcccagcgcgagcaggaggaggccgccccgcagctgcag
cggctggcgctcagcgagccggccgagaaattgcggccgctgcgcggtgaacgcgatcgc
tgccgcgccgagctgcagacgatacaacagcaggcagcccagctgacgcaacagcaggaa
cagcagtcggcgcagttgaccccgctgcagcaggcggtggagaaaacccgccaggcgcag
caagcgcatgccgaacacatgcggcaacagcaacaactgatcgacgagcaggtcgccccg
ctcgaccatcaaatagcccaactgcagtcgacacaggccgaacgtagacaggccggcgat
gccgccgcacagcagtgcgcccagcagcagaccgcgctggagcagctcaccgctcagcgc
agccaactgacgaggcaggccgcacagtttcagcagcagttgaacacgctgaccgaagcg
ctggtcgttcaacagcaacagcagcaggcgctggaggcgcaaacgccgctggccccgctg
cgccagcgcctgagcgtcctggcggatctgcgcccgacgcgccagcagctgtttactctc
gcttctttatcgcagcaaatcgttaaacggctggaacaacagcggcaagagctaaacagc
ggtcaacatgaacttacccagttggaaccacagctagaactcatccgtcagcgatttaag
cagcagaaagcccaccaggccgatgttgaaaaaacctatgcgctggaacaacggatcgtg
ggtctggaggccgagcgcgcccgtttgcaacccggcgccccctgcccgctgtgcggctca
tgcgagcacccggcggtagaacaataccaagaggtaaaactgtcagaaaccgcgcaacgt
ctggagcaaatgaaagtccagaccgaagcattgcaaaaacaaggcgtcgagctgcgagcc
cgttacgacaacctgcaacagcaattgcagcgtcagcagcaaaccatcgcgcaggatgaa
caacagctggccggccaacagcagcagtggcggcagctcagcgcgccgctggcgttcgac
tttacgctggcggatggcgagcaactcagcgcctggctgaacggctgcgacgacgaagaa
cggcgcgggcaacaggcgctgcagcagcatgaacaggcggcgcaggcggtacagcaggcg
aaggatgcgctcatcgatctgcaaacgcagcagcagcagacgcagcaacagctggcgttg
ctcgaagaacgctttacgctgctgcagaaagcccacgccgacagcctgcaacagcagcaa
gagctgcaacaacgctggcaagaaggcgagaagacccttgccgaacgacgcgcgcagcgg
ctgacgctgttcggcgaacagcaggtcgccgaggtgcgcgaacagctgcgcgccaaacaa
accgcctgtgaacaggccagtttgcaggccgccgagcagtggcaaaaggcgcaggaactg
cgcgagcgcctggccggccagcagtccgggctgcaacaacaacacacccagatgcaggag
cggctgcagcaggcgcagcagcagtggcagcaggcgctggccgacagcgaattcgccgat
gaaaccgccttcgccgccgcgctgctggacgatgtcctgcgccgcgaattgcagcagcgc
aaagagcagttgcaacagcggcaggtagaggccaccgccctgctgacacaggcgacgcaa
acgctggagcagcaccggcagaaccgccctgaagggctggatgaagccaacgcggatctc
gatgcgctcacccaatcgctggccgagctggcgcagcagttgaaaacgttgcagctgcgt
cagggcgaactgcgcaatcagctggcaagcgacgccgaacgccgtctcaatcagcaggcg
ctgttcgagcagatcgcccgcagccagcaagactacgatgactggagctacctcaaccaa
ctgatcggctcgaaagaaggcgacaagttccgccgcttcgctcaggggctgacgctcgat
catctggtttacctggccaaccttcagctcggccggctgcacgggcgctacctgctgcag
cgcaagaccagcgacgcgctggagctgcaggtggtggacacctggcaggcggacgcgctg
cgcgatacccgcaccctgtccggcggcgagagcttcctggtcagcctggcgttggcgctg
gcgttgtccgatctggtcagccataaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctggacgccgaaaccctcgataccgcgctggatgcgctggacagcctgaac
gcctccggcaaaaccatcggcgtgatcagccacgtcgaggcgatgaaagaacgcattccg
gtgcagatcaaagtgaaaaaggtcaacgggctcggcgtcagccggctggaggcgcacttc
aggctggaatga
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integrated database retrieval system
