Serratia marcescens WW4: SMWW4_v1c09960
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Entry
SMWW4_v1c09960 CDS
T02448
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c09960 (sbcD)
DNA repair and recombination proteins [BR:
smw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SMWW4_v1c09960 (sbcD)
Archaeal homologous recombinant proteins
SMWW4_v1c09960 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AGE16800
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Position
complement(1105937..1107169)
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AA seq
410 aa
AA seq
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MRLIHTSDWHLGQYFFTKSRAAEHQAFLNWLIEQVDQQQVDALIVAGDLFDTGSPPSYAR
ELYNRFVVELQRTGCQLVVLGGNHDSVATLNESRELLSCLNTTVIASAQGAPEQQIVVLN
RRDGQPGAVLCAIPFLRPRDLLTSRAGESGAQKQQALQEAIAEHYQTLYQAACERRDQLG
LPLPIVATGHLTTVGVTTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQNVAKSEH
IRYSGSPIPLSFDELGKAKSVFLVDFADGALQRVETLTIPQFQPMQLLKGDLAEIERQLR
QFADYAGELPVWLDIEVATQDYLSDIQRRIQLMADALPVEVVLLRRSKEQRRQAIAQQDK
ETLNELSVNEVFERRLAQEADMPEARQRRMHQLFRQVVEAVQHNPEESNP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacctctgactggcaccttggccagtactttttcaccaaaagccgc
gccgccgagcaccaggcttttctgaactggctgatcgaacaggtagatcagcagcaggtg
gatgcgctgatcgtcgccggagatttgttcgataccggctcgccgcccagctatgcccgc
gagctgtacaaccgcttcgtggtggaactgcagcgcaccggctgccagttggtggtgctg
ggcggcaaccacgactcggtggcgacgctgaacgaatcgcgtgagctgctctcctgcctg
aacaccacggtgatcgccagcgcgcagggcgccccggaacagcaaatcgtggtgctgaac
cggcgcgacggccagccgggcgcggtgctgtgcgccattccgttcctgcggccgcgcgat
ctgctcaccagccgcgccggcgaatccggcgcgcagaaacagcaggcgttgcaggaagcc
atcgccgaacattaccaaacgctgtatcaggcggcctgcgagcgccgcgaccagttgggc
ctgccactgccgatcgtcgccaccggccacctgaccaccgtcggcgttaccacctccgac
tcggtgcgcgacatctatatcggcaccctcgacgccttcccggcgcaggccttccccccc
gccgactatatcgcgctgggccacattcaccgcgcgcagaacgtcgccaaatcggagcat
attcgctatagcggctcgccgatcccgctgagcttcgatgagctgggcaaagccaaaagc
gtcttcctggtggatttcgccgacggcgctttgcagcgggtagaaacgttaacgatcccg
cagtttcagcccatgcaactgctcaaaggcgatctggccgagatcgaacggcagctgcgg
caatttgccgattatgccggcgagctgccggtgtggctggatatcgaagtggcgacgcag
gactacctcagcgatatccaacgccgcatccagctgatggcggatgcgctgccggtggaa
gtggtgctgctgcggcgcagtaaagagcagcgccgccaggcgatcgcgcagcaggataag
gaaacgctcaacgagctgagcgtcaacgaggtgttcgaacggcgcctggcgcaggaggcc
gacatgcccgaagcgcgccaacggcggatgcaccaactgttccgccaggtggtcgaggcg
gtgcagcacaaccctgaagagagcaacccatga
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